CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
plastid 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90623	Soybean	nucleus	97.2	18.51
KRH36131	Soybean	plastid	95.33	18.44
KRH60945	Soybean	plastid	28.97	4.55
KRG90712	Soybean	cytosol, endoplasmic reticulum, plastid	25.23	4.32
KRH51622	Soybean	cytosol, plastid	28.04	4.31
KRH02371	Soybean	plastid	18.69	4.1
KRH02451	Soybean	plastid	18.69	4.1
KRH37687	Soybean	plastid	14.95	3.3
KRG91073	Soybean	plastid	24.3	3.27
KRH27783	Soybean	cytosol, plastid	15.89	3.26
KRH59429	Soybean	plastid	14.95	3.18
KRH12254	Soybean	plastid	24.3	3.14
KRH37281	Soybean	plastid	24.3	3.13
KRH14115	Soybean	plastid	14.02	3.12
KRH77730	Soybean	plastid	14.95	3.06
KRH46714	Soybean	plastid	14.02	2.91
KRH43291	Soybean	plastid	14.02	2.85
KRH56998	Soybean	nucleus	20.56	2.56
KRH03384	Soybean	nucleus	20.56	2.56
KRH01436	Soybean	plastid	19.63	2.4
KRH45156	Soybean	plastid	19.63	2.39
KRH66918	Soybean	cytosol	18.69	2.39
KRG95241	Soybean	plastid	13.08	2.06
KRH27571	Soybean	plastid	7.48	1.48

Protein Annotations

EMBL:ACUP02003159	EnsemblPlants:KRH57931	EnsemblPlantsGene:GLYMA_05G093700	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF722	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	ProteinID:KRH57931	ProteinID:KRH57931.1
TIGRFAMs:TIGR00756	UniParc:UPI0002963C70	UniProt:K7KP72	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:23713692..23714470

Molecular Weight (calculated)

12163.6 Da

IEP (calculated)

5.870

GRAVY (calculated)

-0.413

Length

107 amino acids

Sequence
(BLAST)

001: MDFFMLITTY GKLGDFNGAE KVLGLMNKNG YAPNVVSQTA LMEAYGKGGR YNNAEAIFRR MQKWGLEPSA FTYQIILKTF VHGNKFREAE ELFDNLLNDE
101: NSPLKPD

Best Arabidopsis Sequence Match ( AT3G59040.2 )
(BLAST)

001: MFFSFRLLKV LVFHLQIRPC VLLCVSQRKL QNNIINVGVK IQNRFRVVCM GMLAPRKFLQ KRRKMEVFKD AADETDQKRW RGLMLEIEST GSAVPVLRQY
101: KTDGDQGLPR DLVLGTLVRF KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN VISYTALMES YGRGGKCNNA
201: EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301: SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA
401: YVNASDMEGA EKFFKRIKVD GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA LGWYKEMESC GVPPDQKAKN
501: VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J741]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.