Factsheet for Bra019526.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15384	Canola	cytosol	71.21	44.13
AT2G31400.1	Thale cress	plastid	68.56	19.72
Bra018247.1-P	Field mustard	nucleus	22.35	19.47
PGSC0003DMT400018827	Potato	cytosol	55.3	19.31
VIT_07s0005g01660.t01	Wine grape	plastid	63.26	19.26
GSMUA_Achr2P02090_001	Banana	cytosol	47.35	19.23
Os12t0562300-01	Rice	cytosol	21.59	18.63
Bra021733.1-P	Field mustard	cytosol	76.14	18.31
Solyc06g009520.2.1	Tomato	nucleus, plastid	55.3	17.36
KRH45156	Soybean	plastid	47.73	14.35
KRH01436	Soybean	plastid	46.59	14.06
Zm00001d030624_P001	Maize	plastid	44.7	13.56
EES16159	Sorghum	plastid	44.7	13.53
TraesCS5D01G097800.1	Wheat	plastid	43.56	13.43
TraesCS5A01G085800.1	Wheat	plastid	43.18	13.29
TraesCS5B01G091600.1	Wheat	plastid	43.18	13.29
Bra018246.1-P	Field mustard	plastid	20.83	11.13
Bra006974.1-P	Field mustard	cytosol, endoplasmic reticulum	20.83	11.02
Bra037464.1-P	Field mustard	plastid	17.05	8.41
Bra011847.1-P	Field mustard	plastid	14.39	7.82
Bra020748.1-P	Field mustard	plastid	14.39	7.74
Bra035290.1-P	Field mustard	plastid	20.45	6.75
Bra017881.1-P	Field mustard	plastid	17.05	6.43
Bra015889.1-P	Field mustard	plastid	20.08	6.13
Bra004642.1-P	Field mustard	cytosol, plastid	18.94	6.11
HORVU5Hr1G022350.1	Barley	plastid	11.74	6.03
Bra035352.1-P	Field mustard	mitochondrion	10.23	5.6
Bra005366.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.91	5.53
Bra024454.1-P	Field mustard	plastid	16.29	5.26

Protein Annotations

EnsemblPlants:Bra019526.1	EnsemblPlants:Bra019526.1-P	EnsemblPlantsGene:Bra019526	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF366	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	SEG:seg
TIGRFAMs:TIGR00756	UniParc:UPI000253F073	UniProt:M4DSN3	MapMan:35.1	:	:

Description

AT2G31400 (E=6e-059) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA06:-:12545060..12547011

Molecular Weight (calculated)

28874.9 Da

IEP (calculated)

5.907

GRAVY (calculated)

0.090

Length

264 amino acids

Sequence
(BLAST)

001: MASVGIKKDV VTYNALLGGY GKQRNYFEVK NVFAEMKRER VTPNLLTYSM LIDVYSKGGL YKETMEIFKE FKGAGLRADV VLYSALIDAL CKNVLVGSAV
101: SLIDEMTKEG ISPNVVTYYS IIDAFGRSAT VEYFAESGEG GGGSSSLLPS SSLSKLAETE DNQLEIKPNV VTFSAILNAC SRCNSFADAS VLLEKLRLFD
201: SQVYGVVHVV VLIPKHITIV MEYAVGGGLF DRICSAGRFK EDEAKAAAAM AIKIQRQNEE IWPR

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.