Factsheet for TraesCS5A01G085800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G097800.1	Wheat	plastid	97.79	98.01
TraesCS5B01G091600.1	Wheat	plastid	97.79	97.79
HORVU5Hr1G022350.1	Barley	plastid	56.41	94.16
Os12t0562300-01	Rice	cytosol	31.47	88.24
EES16159	Sorghum	plastid	85.08	83.72
Zm00001d030624_P001	Maize	plastid	84.15	82.99
GSMUA_Achr2P02090_001	Banana	cytosol	54.78	72.31
CDY15384	Canola	cytosol	26.92	54.23
PGSC0003DMT400018827	Potato	cytosol	44.41	50.4
Bra018247.1-P	Field mustard	nucleus	17.72	50.16
CDY19091	Canola	cytosol	42.31	49.79
VIT_07s0005g01660.t01	Wine grape	plastid	49.07	48.56
Solyc06g009520.2.1	Tomato	nucleus, plastid	46.15	47.09
CDY56616	Canola	plastid	42.42	46.13
CDY10802	Canola	plastid	45.22	45.7
AT2G31400.1	Thale cress	plastid	46.74	43.68
Bra019526.1-P	Field mustard	cytosol	13.29	43.18
Bra018246.1-P	Field mustard	plastid	24.13	41.9
KRH45156	Soybean	plastid	42.31	41.34
KRH01436	Soybean	plastid	41.72	40.91
Bra021733.1-P	Field mustard	cytosol	43.82	34.24
TraesCS2A01G194800.1	Wheat	endoplasmic reticulum, extracellular	14.34	26.45
TraesCS7A01G407400.1	Wheat	cytosol	11.89	22.32
TraesCS5A01G486300.1	Wheat	plastid	19.93	19.68
TraesCS7A01G495500.1	Wheat	plastid	18.53	19.61
TraesCS7A01G133100.1	Wheat	plastid	11.19	18.9
TraesCS6A01G303300.1	Wheat	plastid	11.54	18.33
TraesCS4A01G178100.5	Wheat	plastid	10.96	17.38
TraesCS5A01G528400.1	Wheat	plastid	10.84	17.35
TraesCS2A01G239500.2	Wheat	plastid	16.9	16.98
TraesCS3A01G523700.1	Wheat	plastid	11.54	16.28
TraesCS6A01G163600.2	Wheat	nucleus	11.07	15.06
TraesCS5A01G486200.1	Wheat	cytosol	0.35	3.19

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002625
InterPro:IPR002885	InterPro:IPR011990	PFAM:PF12854	PFAM:PF13041	PFAM:PF13812	PFscan:PS50828
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF366	InterPro:Pentatricopeptide_repeat	SMART:SM00463	SUPFAM:SSF160443
InterPro:Smr_dom	InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS5A01G085800	EnsemblPlants:TraesCS5A01G085800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:113717840..113722331

Molecular Weight (calculated)

93080.2 Da

IEP (calculated)

8.619

GRAVY (calculated)

0.012

Length

858 amino acids

Sequence
(BLAST)

001: MAPTTHFTPS QAHAAAASHH PAAAAAAAPA TATARLHASA SASAPAAAAA LCPPFLAAGS HSVACPPVQN PIFSGPAAPW AVQPQRAAVG ALGPEFRRAR
101: STKNISKRNN RGAGGQDRGG RTSSAAAGRC VDKLLRVAPD DRRALGASLS SFRGELLGPD DYCHVLRELG DRDKSAVRAL EVFHAALPLV GNGSVDKGKL
201: LTAAIGALGK MGRPDLARRG FDAGIAGGYG KTVFAYSALI SAYARSGLAT EAMGVLESMK GAGLRPTTVT YNAVIDACGK GGVDLRFTLG YFRQMLRDGL
301: CPDRKTFNSL LSACSRAGHL VDARAVFDEM THLGIGRDIY TYNTFIDAIC KCGNIELAMQ VLLDMEAKKL KPNVVTYSTL IDGYSKLEKY EEALKLYEKM
401: KSLGIRLDRV CYNTVLAIYV KTGKYAEIAI VCDEMEDSGI EKDTVTYNSL INGYGKQGRL DIVSFLVQDM RRRGVAPSVL TYSTLIDIYS KAGMHGDAFN
501: VYLDFKESGL KADVVLFSSF IDTLAKNGLV EWALSLLNDM TEMGIKPNVV TYNTIIDAFG KSKVHGEEDP EVGDMGIVGV YNGQIIRAAN PVTRGRSAID
601: VRMRRSQELY FILELFQKMV QQGVRPNVVT FSAILNACSR CNNFEDAALL LEQLRLFDNF VYGVAYGLLM GYQEIWSQAQ SLFNQLGRMD SPTSSAFYNA
701: LTDMLWHFGQ RQGAQLIVLE GVNRRVWENT WSEFCLDLHL MSCGAAQAMV HAWLLNVRSI VFEGRAMPEF LSILTGWGKH SKIAGASTLR HVIEALLNSI
801: GAPFQVERFN IGRFVSPSVV VAAWLRESGT INMILLSDER AQRASPSNLV PRLEALQL

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.