Factsheet for HORVU5Hr1G022350.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G091600.1	Wheat	plastid	95.14	56.99
TraesCS5D01G097800.1	Wheat	plastid	94.75	56.89
TraesCS5A01G085800.1	Wheat	plastid	94.16	56.41
Zm00001d030624_P001	Maize	plastid	80.93	47.82
EES16159	Sorghum	plastid	80.93	47.71
Bra018246.1-P	Field mustard	plastid	39.3	40.89
GSMUA_Achr2P02090_001	Banana	cytosol	42.61	33.69
VIT_07s0005g01660.t01	Wine grape	plastid	41.05	24.34
PGSC0003DMT400018827	Potato	cytosol	35.6	24.21
CDY10802	Canola	plastid	39.11	23.67
Solyc06g009520.2.1	Tomato	nucleus, plastid	38.72	23.66
CDY19091	Canola	cytosol	33.27	23.46
AT2G31400.1	Thale cress	plastid	40.08	22.44
CDY56616	Canola	plastid	33.46	21.8
KRH45156	Soybean	plastid	34.63	20.27
KRH01436	Soybean	plastid	34.44	20.23
Bra021733.1-P	Field mustard	cytosol	35.6	16.67
HORVU2Hr1G035060.2	Barley	cytosol	17.12	14.08
HORVU2Hr1G056820.1	Barley	plastid	20.62	12.94
HORVU5Hr1G114630.1	Barley	mitochondrion	19.65	12.12
Bra019526.1-P	Field mustard	cytosol	6.03	11.74
HORVU7Hr1G111000.5	Barley	plastid	17.32	10.91
HORVU2Hr1G043170.1	Barley	mitochondrion	14.01	10.89
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	10.7	10.78
HORVU7Hr1G027800.8	Barley	cytosol	9.92	10.52
HORVU4Hr1G086600.3	Barley	plastid	10.12	10.48
HORVU4Hr1G024360.2	Barley	endoplasmic reticulum, vacuole	11.28	10.03
HORVU3Hr1G114340.4	Barley	mitochondrion	11.87	9.62
HORVU0Hr1G007320.4	Barley	cytosol	8.56	9.54
HORVU6Hr1G075250.5	Barley	plastid	9.14	9.4
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	11.28	8.99
CDY15384	Canola	cytosol	7.2	8.69
Bra018247.1-P	Field mustard	nucleus	0.97	1.65
Os12t0562300-01	Rice	cytosol	0.97	1.63

Protein Annotations

EnsemblPlants:HORVU5Hr1G022350.1	EnsemblPlantsGene:HORVU5Hr1G022350	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR44149	PANTHER:PTHR44149:SF1
PFAM:PF12854	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	UniParc:UPI000B4736F8	UniProt:A0A287QLX6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:112963002..112970081

Molecular Weight (calculated)

53426.3 Da

IEP (calculated)

9.044

GRAVY (calculated)

-0.047

Length

514 amino acids

Sequence
(BLAST)

001: MAPTTHFTPS QAHAAAASHH PAAAAAAATA TATARLHASA SASAPAAAAA LCPPFLAAGS HSVACPPVQN PIFSGPAAPW AVQPQRAAAG ALGPEFRRAR
101: STKNISKRNN RGAGGQDRGA RASSAAAGRC VDKLLRVPPE DRRALGASLS SFRGELVGPD DYCHVLRGLG DRDKSALRAL EVFHAALPLV GNGSVDKGKL
201: LTAAIGALGK MGRPDLARRG FDAGIAGGYG KTVFAYSALI SAYARSGLAT EAMGVLESMK GAGLRPTTVT YNAVIDACGK GGVDLRFTLG YFRQMLRDGL
301: CPDRKTFNSL LSACSRAGHL EDARAVFDEM IHLGIGRDIY TYNTFIDAIC KCGNIELAMQ VLLDMEAKNM KPNVVTYSTL IDGYSKLEKY DEALKLYEKM
401: KSLGIRLDRV CYNTVLAIYV KTGKYAEIAI VCDEMEDSGI EKDTVTYNSL INGYGKQGRL DIVSFLVQDM RRRGVAPSVL TYSTLIDIYS KAGXXXXXXX
501: XXXXECTEMH LMSI

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.