Factsheet for HORVU2Hr1G043170.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G238300.1	Wheat	plastid	98.34	97.16
EER99505	Sorghum	plastid	91.53	90.57
Zm00001d021716_P001	Maize	plastid	91.07	90.12
Os07t0548300-01	Rice	plastid	80.48	82.48
GSMUA_Achr9P12090_001	Banana	mitochondrion	64.45	61.92
VIT_18s0122g01380.t01	Wine grape	cytosol, mitochondrion, plastid	55.82	53.09
CDY31603	Canola	plastid	52.34	52.19
KRH51622	Soybean	cytosol, plastid	54.46	51.72
AT5G42310.1	Thale cress	plastid	55.22	51.48
CDX71562	Canola	mitochondrion, plastid	53.86	50.93
Bra017881.1-P	Field mustard	plastid	53.4	50.43
PGSC0003DMT400030453	Potato	mitochondrion	53.1	50.36
Solyc08g045850.2.1	Tomato	nucleus	52.8	49.93
KRH60945	Soybean	plastid	51.44	49.85
HORVU0Hr1G007320.4	Barley	cytosol	25.42	36.44
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	27.84	36.08
HORVU2Hr1G035060.2	Barley	cytosol	20.12	21.28
HORVU4Hr1G086600.3	Barley	plastid	14.37	19.15
HORVU7Hr1G111000.5	Barley	plastid	23.0	18.63
HORVU7Hr1G027800.8	Barley	cytosol	13.62	18.56
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	16.49	16.9
HORVU3Hr1G114340.4	Barley	mitochondrion	16.04	16.72
HORVU6Hr1G075250.5	Barley	plastid	12.41	16.4
HORVU5Hr1G114630.1	Barley	mitochondrion	20.27	16.09
HORVU4Hr1G024360.2	Barley	endoplasmic reticulum, vacuole	13.62	15.57
HORVU2Hr1G056820.1	Barley	plastid	17.7	14.29
HORVU5Hr1G022350.1	Barley	plastid	10.89	14.01

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.12.4.2	UniProt:A0A287HUA3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003727	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0010239	GO:GO:0016020
GO:GO:0016043	GO:GO:0042644	GO:GO:0042651	EnsemblPlantsGene:HORVU2Hr1G043170	EnsemblPlants:HORVU2Hr1G043170.1	InterPro:IPR002885
InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF788	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B489605	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:219413715..219420865

Molecular Weight (calculated)

72677.8 Da

IEP (calculated)

6.926

GRAVY (calculated)

-0.003

Length

661 amino acids

Sequence
(BLAST)

001: HHHQRQRLRL PVPSCTTSSV SVSVSAAGPA SRYDFEPLLA YLSDPSTVAS LTSPSPPPSV PAPERRLAAS YSAVPSHEWH ALLRGLAASD ASLPLAFALL
101: PFLQRHRLCF PLDLLLSSLI HSLSVSGRLL PHSLLLSFPP SLSDPPSPLL LNSLLAASAA ASRPAIALRL LALIREHNFL PDLASYSHLL ASLLNTRDPP
201: DAAILERLLG DLRDSRLEPD APLFSDLISA FARAALPDAA LELLASAQAI GLTPRSNAVT ALISALGIAG RVPEAEALFL EFFLAGEIKP RTRAYNALLK
301: GYVKIGSLKN AEHVLDEMSE CGVAPDEATY SLLVDAYTRA GRWESARILL KEMEADGVKP SSYVFSRILA GFRDRGDWQK AFAVLREMHA SGVQPDRHFY
401: NVMIDTFGKY NCLGHAMDVF NRMRGEGIEP DVVTWNTLID AHCKGGRHDC AMELFKEMRE SNCPPGTTTY NIMINLLGEQ ERWVGVETMM SEMKEQGLVP
501: NIITYTTLVD VYGRSGRYKE AIDCIEAMKA DGLKPSPTMY HALVNAYAQR GLADHALNVV KAMRADGLEA STVVLNSLIN AFGEDRRVVE AFSVLQFMKE
601: NDFRPDVITY TTLMKALIRV EQFDKVPVIY EEMITSGCAP DRKARAMLRS ALRYMKHTRV A

Best Arabidopsis Sequence Match ( AT5G42310.1 )
(BLAST)

001: MLLLQQPPLV STRFHSLYFL THHHHHHHRF FQPPISAFSA TTSASLPSPS PSSSSSYFSS WNGLDTNEEE DNEFSSEVHR RYDFSPLLKF LSRFGPVELA
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS

Arabidopsis Description

CRP1Pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L844]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.