Factsheet for Os07t0548300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99505	Sorghum	plastid	85.89	82.93
Zm00001d021716_P001	Maize	plastid	85.58	82.63
TraesCS2B01G238300.1	Wheat	plastid	84.34	81.32
HORVU2Hr1G043170.1	Barley	mitochondrion	82.48	80.48
GSMUA_Achr9P12090_001	Banana	mitochondrion	59.38	55.67
KRH60945	Soybean	plastid	50.7	47.95
VIT_18s0122g01380.t01	Wine grape	cytosol, mitochondrion, plastid	51.16	47.48
CDY31603	Canola	plastid	48.22	46.91
PGSC0003DMT400030453	Potato	mitochondrion	49.77	46.05
KRH51622	Soybean	cytosol, plastid	49.61	45.98
CDX71562	Canola	mitochondrion, plastid	49.61	45.78
Bra017881.1-P	Field mustard	plastid	49.46	45.57
Solyc08g045850.2.1	Tomato	nucleus	49.3	45.49
AT5G42310.1	Thale cress	plastid	49.92	45.42
Os06t0710800-01	Rice	cytosol	24.81	32.52
Os02t0170000-02	Rice	cytosol	14.57	20.04
Os05t0275000-01	Rice	cytosol, plastid	23.41	19.04
Os03t0115300-00	Rice	plastid	14.42	18.98
Os03t0309800-02	Rice	plastid	14.11	18.16
Os06t0172000-01	Rice	plastid	14.11	17.81
Os07t0590600-00	Rice	plastid	20.78	17.09
Os08t0191900-01	Rice	plastid	15.81	16.75
Os07t0213300-01	Rice	cytosol	15.81	15.07
Os02t0750400-01	Rice	cytosol	4.81	14.62
Os03t0824100-01	Rice	plastid	18.76	13.94
Os12t0562300-01	Rice	cytosol	5.12	10.78

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.12.4.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003727
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006397	GO:GO:0006412
GO:GO:0006417	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009451	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0010239
GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0042644	GO:GO:0042651
GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os07g0548300	EnsemblPlants:Os07t0548300-01
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF788
InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001C7D612	SEG:seg

Description

Hypothetical conserved gene. (Os07t0548300-01)

Coordinates

chr7:+:21753822..21757186

Molecular Weight (calculated)

70898.7 Da

IEP (calculated)

6.331

GRAVY (calculated)

0.090

Length

645 amino acids

Sequence
(BLAST)

001: MPASSLLPPT LLPHRHRLRL PPAGCSTSSS PSATRYDFDP LLSYLSTTSS SPSPPPTSVL PVTESRLAAS YAAVPAREWH ALLRELAATD ASLPLAFALL
101: PFLHRHRLCF PLDLLLSSLL HSLSVSGRLL PHSLLLSFPP SLSDPPSPLL LNSLLAASAA ASRPAVALRL LGLLREHSFL PDLASYSHLL ASLLNTRDPP
201: DAALLDRLLG DLRESRLEPD APLFSDLISA FARARLPDAA LELLASAQAI GLTPRSNAVT ALISSLGSAR RVAEAEALFL EFFLAGEIKP RTRAYNALLK
301: GYVKIGSLKN AEQVLDEMSQ CGVAPDEATY SLLVDAYTRA GRWESARILL KEMEADGVKP SSYVFSRILA GFRDRGEWQK AFAVLREMHA SGVRPDRHFY
401: NVMIDTFGKY NCLGHAMDAF DRMREEGIEP DVVTWNTLID AHCKGGRHDR AIELFDEMRE SNCPLGTTTY NIMINLLGEE QRWEGVEAML AEMKEQGLVP
501: NIITYTTLVD VYGRSGRFKE AVDCIEAMKA DGLKPSPTMY HALVNAYAQR GLADHALNVV KAMRADGLEA STVVLNSLIN AFGEDRRIAE AFSVLQFMKE
601: NVSSCAVLCF AVLSYIVLPL DDHIILEIYL YLMKSHIFCI LDCRV

Best Arabidopsis Sequence Match ( AT5G42310.1 )
(BLAST)

001: MLLLQQPPLV STRFHSLYFL THHHHHHHRF FQPPISAFSA TTSASLPSPS PSSSSSYFSS WNGLDTNEEE DNEFSSEVHR RYDFSPLLKF LSRFGPVELA
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS

Arabidopsis Description

CRP1Pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L844]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.