Factsheet for Os02t0170000-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84443	Sorghum	cytosol	85.29	66.12
Zm00001d015377_P003	Maize	plastid	83.58	65.66
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	78.25	56.9
GSMUA_Achr7P03530_001	Banana	cytosol	66.52	52.97
VIT_01s0011g01970.t01	Wine grape	cytosol	63.33	51.03
PGSC0003DMT400027006	Potato	cytosol, plastid	60.77	49.48
CDY31666	Canola	cytosol	61.62	46.39
AT2G35130.2	Thale cress	endoplasmic reticulum, golgi	60.13	46.0
Solyc02g068760.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	60.55	45.59
KRG90712	Soybean	cytosol, endoplasmic reticulum, plastid	60.13	45.12
CDX84260	Canola	cytosol, nucleus, plastid	61.83	45.1
TraesCS6D01G147800.2	Wheat	cytosol, mitochondrion	56.72	44.86
TraesCS6B01G186300.2	Wheat	cytosol, mitochondrion	58.42	43.7
TraesCS6A01G163600.2	Wheat	nucleus	57.57	42.79
Bra005366.1-P	Field mustard	cytosol, mitochondrion, nucleus	59.91	36.97
Os06t0710800-01	Rice	cytosol	20.68	19.72
Os03t0115300-00	Rice	plastid	18.98	18.16
Os06t0172000-01	Rice	plastid	18.12	16.63
Os02t0750400-01	Rice	cytosol	7.46	16.51
Os08t0191900-01	Rice	plastid	20.9	16.09
Os03t0309800-02	Rice	plastid	16.84	15.77
Os07t0548300-01	Rice	plastid	20.04	14.57
Os07t0590600-00	Rice	plastid	23.88	14.29
Os07t0213300-01	Rice	cytosol	19.4	13.44
Os05t0275000-01	Rice	cytosol, plastid	21.32	12.61
Os03t0824100-01	Rice	plastid	20.47	11.06
Os12t0562300-01	Rice	cytosol	4.9	7.52

Protein Annotations

MapMan:1.1.8.1.6.1	Gene3D:1.25.40.10	MapMan:16.12.4.6	UniProt:A0A0P0VFJ3	ProteinID:BAS77194.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os02g0170000	EnsemblPlants:Os02t0170000-02	PFAM:PF01535	PFAM:PF13041
PFAM:PF17177	InterPro:PPR_long	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF421	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000393C273	SEG:seg	:

Description

Conserved hypothetical protein. (Os02t0170000-01);Pentatricopeptide repeat domain containing protein. (Os02t0170000-02)

Coordinates

chr2:+:3798551..3800882

Molecular Weight (calculated)

52362.0 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.224

Length

469 amino acids

Sequence
(BLAST)

001: ESLDNIPSTH NLFDDLVNVA VQFRMNKKWD LIIPVCEWIL YRSSFRPDII CYNLLIESYG KKRQLNKAES IYMALLEAQC VPTEDTYALL LRAYCNAGSL
101: HRAEGVISEM REHGIPPNAT VYNAYLDGLL KARCTEKAVE VYQRMKRERC RANTETFTLM INVYGKAKQP MSSMKVFNEM KSIGCKPNIC TYTALVNAFA
201: REGLCEKAEE VFEEMQQAGH EPDVYAYNAL MEAYSRAGLP QGASEIFSLM QHMGCEPDRA SYNILVDAYG RAGLHEDAEA VFEELKQRGM SPTMKSHMLL
301: LAAHARSGNA TRCEEVMAQL HKSGLTPDTF ALNAMLNAYA RAGRLDDMER LFAAMERRGD ADVGTYNVAV NAYGRAGYVG RMEAAFAAVA ARGLAADVVT
401: WTARMGAYAR RKEYGRCVGM VEEMVDAGCY PDAGTARVLL AACSDERQVE QVTAIVRSMH KKPKTLFTI

Best Arabidopsis Sequence Match ( AT2G35130.3 )
(BLAST)

001: MLVAGNALNC LFIDSSGFQR YLGFGVTNLN GATVKSYKQE GFVIDERGKL KRFNRKKLSR KRCGSLRGRG WKYGSGFVDG IFPVLSPIAQ KILSFIQKET
101: DPDKVADVLG ALPSTHASWD DLINVSVQLR LNKKWDSIIL VCEWILRKSS FQPDVICFNL LIDAYGQKFQ YKEAESLYVQ LLESRYVPTE DTYALLIKAY
201: CMAGLIERAE VVLVEMQNHH VSPSVTVYNA YIEGLMKRKG NTEEAIDVFQ RMKRDRCKPT TETYNLMINL YGKASKSYMS WKLYCEMRSH QCKPNICTYT
301: ALVNAFAREG LCEKAEEIFE QLQEDGLEPD VYVYNALMES YSRAGYPYGA AEIFSLMQHM GCEPDRASYN IMVDAYGRAG LHSDAEAVFE EMKRLGIAPT
401: MKSHMLLLSA YSKARDVTKC EAIVKEMSEN GVEPDTFVLN SMLNLYGRLG QFTKMEKILA EMENGPCTAD ISTYNILINI YGKAGFLERI EELFVELKEK
501: NFRPDVVTWT SRIGAYSRKK LYVKCLEVFE EMIDSGCAPD GGTAKVLLSA CSSEEQVEQV TSVLRTMHKG VTVSSLVPKL MAKSLTVN

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IJS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.