Factsheet for AT2G35130.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31666	Canola	cytosol	84.99	83.63
CDX84260	Canola	cytosol, nucleus, plastid	85.48	81.49
VIT_01s0011g01970.t01	Wine grape	cytosol	64.27	67.7
Bra005366.1-P	Field mustard	cytosol, mitochondrion, nucleus	82.54	66.58
PGSC0003DMT400027006	Potato	cytosol, plastid	61.01	64.93
GSMUA_Achr7P03530_001	Banana	cytosol	59.05	61.46
KRG90712	Soybean	cytosol, endoplasmic reticulum, plastid	61.66	60.48
Os02t0170000-02	Rice	cytosol	46.0	60.13
Solyc02g068760.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	60.85	59.87
OQU84443	Sorghum	cytosol	54.98	55.7
Zm00001d015377_P003	Maize	plastid	54.0	55.44
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	51.55	48.99
TraesCS6D01G147800.2	Wheat	cytosol, mitochondrion	41.11	42.5
TraesCS6B01G186300.2	Wheat	cytosol, mitochondrion	42.41	41.47
TraesCS6A01G163600.2	Wheat	nucleus	41.76	40.57
AT3G53170.2	Thale cress	plastid	15.17	18.64
AT5G48730.1	Thale cress	plastid	15.33	18.5
AT3G59040.2	Thale cress	endoplasmic reticulum	17.29	17.97
AT3G06430.1	Thale cress	plastid	13.87	17.49
AT5G42310.1	Thale cress	plastid	18.27	15.8
AT2G18940.1	Thale cress	plastid	20.55	15.33
AT4G39620.1	Thale cress	plastid	14.03	15.28
AT5G02860.2	Thale cress	plastid	20.39	15.26
AT5G36300.2	Thale cress	cytosol	7.99	14.85
AT1G74850.1	Thale cress	plastid	18.11	12.88
AT2G41720.1	Thale cress	cytosol, plastid	16.31	12.17
AT2G31400.1	Thale cress	plastid	16.15	10.78

Protein Annotations

MapMan:1.1.8.1.6.1	Gene3D:1.25.40.10	EntrezGene:818079	ProteinID:AEC09069.1	ArrayExpress:AT2G35130	EnsemblPlantsGene:AT2G35130
RefSeq:AT2G35130	TAIR:AT2G35130	RefSeq:AT2G35130-TAIR-G	EnsemblPlants:AT2G35130.2	TAIR:AT2G35130.2	Unigene:At.42940
UniProt:F4IJS7	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990
RefSeq:NP_001189682.1	PFAM:PF13041	PFAM:PF13812	PO:PO:0000293	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF421	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001E92D49	:

Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IJS7]

Coordinates

chr2:-:14807449..14810229

Molecular Weight (calculated)

69550.4 Da

IEP (calculated)

7.821

GRAVY (calculated)

-0.165

Length

613 amino acids

Sequence
(BLAST)

001: MFVHKLRCYY GFLLKHFENC LLWLVAGNAL NCLFIDSSGF QRYLGFGVTN LNGATVKSYK QEGFVIDERG KLKRFNRKKL SRKRCGSLRG RGWKYGSGFV
101: DGIFPVLSPI AQKILSFIQK ETDPDKVADV LGALPSTHAS WDDLINVSVQ LRLNKKWDSI ILVCEWILRK SSFQPDVICF NLLIDAYGQK FQYKEAESLY
201: VQLLESRYVP TEDTYALLIK AYCMAGLIER AEVVLVEMQN HHVSPKTIGV TVYNAYIEGL MKRKGNTEEA IDVFQRMKRD RCKPTTETYN LMINLYGKAS
301: KSYMSWKLYC EMRSHQCKPN ICTYTALVNA FAREGLCEKA EEIFEQLQED GLEPDVYVYN ALMESYSRAG YPYGAAEIFS LMQHMGCEPD RASYNIMVDA
401: YGRAGLHSDA EAVFEEMKRL GIAPTMKSHM LLLSAYSKAR DVTKCEAIVK EMSENGVEPD TFVLNSMLNL YGRLGQFTKM EKILAEMENG PCTADISTYN
501: ILINIYGKAG FLERIEELFV ELKEKNFRPD VVTWTSRIGA YSRKKLYVKC LEVFEEMIDS GCAPDGGTAK VLLSACSSEE QVEQVTSVLR TMHKGVTVSS
601: LVPKLMAKSL TVN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.