Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004642.1-P | Field mustard | cytosol, plastid | 87.96 | 88.39 |
| CDX79920 | Canola | cytosol, plastid | 87.47 | 88.0 |
| CDY23832 | Canola | plastid | 87.35 | 87.78 |
| VIT_08s0007g08590.t01 | Wine grape | cytosol | 66.67 | 64.32 |
| KRH66918 | Soybean | cytosol | 64.48 | 63.32 |
| Solyc04g015950.1.1 | Tomato | plastid | 61.68 | 59.65 |
| Os07t0213300-01 | Rice | cytosol | 48.18 | 58.49 |
| KRG95241 | Soybean | plastid | 45.74 | 55.21 |
| KXG36530 | Sorghum | plastid | 54.87 | 55.07 |
| GSMUA_Achr7P21150_001 | Banana | cytosol, plastid | 56.08 | 55.01 |
| HORVU2Hr1G056820.1 | Barley | plastid | 54.62 | 54.82 |
| TraesCS2B01G269700.1 | Wheat | plastid | 53.65 | 54.04 |
| Zm00001d021871_P002 | Maize | plastid | 52.31 | 53.42 |
| TraesCS2D01G244500.3 | Wheat | plastid | 53.89 | 52.86 |
| TraesCS2A01G239500.2 | Wheat | plastid | 53.28 | 51.29 |
| AT1G74850.1 | Thale cress | plastid | 19.95 | 19.03 |
| AT5G42310.1 | Thale cress | plastid | 16.06 | 18.62 |
| AT2G18940.1 | Thale cress | plastid | 18.13 | 18.13 |
| AT5G02860.2 | Thale cress | plastid | 17.52 | 17.58 |
| AT3G06430.1 | Thale cress | plastid | 10.1 | 17.08 |
| AT2G31400.1 | Thale cress | plastid | 18.37 | 16.45 |
| AT5G36300.2 | Thale cress | cytosol | 6.57 | 16.36 |
| AT2G35130.2 | Thale cress | endoplasmic reticulum, golgi | 12.17 | 16.31 |
| AT5G48730.1 | Thale cress | plastid | 9.73 | 15.75 |
| AT3G53170.2 | Thale cress | plastid | 9.49 | 15.63 |
| AT4G39620.1 | Thale cress | plastid | 10.58 | 15.45 |
| AT3G59040.2 | Thale cress | endoplasmic reticulum | 10.83 | 15.08 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:818771 | UniProt:A0A178VXZ9 | ProteinID:AAC02776.1 | ProteinID:AEC10025.1 |
| ArrayExpress:AT2G41720 | EnsemblPlantsGene:AT2G41720 | RefSeq:AT2G41720 | TAIR:AT2G41720 | RefSeq:AT2G41720-TAIR-G | EnsemblPlants:AT2G41720.1 |
| TAIR:AT2G41720.1 | EMBL:AY091135 | EMBL:AY117242 | Unigene:At.43624 | Symbol:EMB2654 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008380 | GO:GO:0009451 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010239 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR002885 |
| InterPro:IPR011990 | RefSeq:NP_850356.1 | ProteinID:OAP10155.1 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF1614 | InterPro:Pentatricopeptide_repeat | UniProt:Q8RWS8 |
| SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000009CC74 | : | : |
Description
EMB2654EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]
Coordinates
chr2:-:17403645..17407325
Molecular Weight (calculated)
92419.0 Da
IEP (calculated)
9.033
GRAVY (calculated)
-0.188
Length
822 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVTNFKLV TPPESSRADK PGATKASDAF QEKKSVSVNY DRGEHEVSVN IGGLRKADIP RRYRIRVEND RFQKDWSVSE VVDRLMALNR WEEVDGVLNS
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LESLRNKGEG LIPTFRHEGT LL
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LESLRNKGEG LIPTFRHEGT LL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.