Factsheet for HORVU2Hr1G056820.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G269700.1	Wheat	plastid	94.02	94.36
TraesCS2D01G244500.3	Wheat	plastid	93.28	91.17
TraesCS2A01G239500.2	Wheat	plastid	93.53	89.7
KXG36530	Sorghum	plastid	81.32	81.32
Os07t0213300-01	Rice	cytosol	65.69	79.47
Zm00001d021871_P002	Maize	plastid	76.31	77.64
GSMUA_Achr7P21150_001	Banana	cytosol, plastid	60.2	58.83
VIT_08s0007g08590.t01	Wine grape	cytosol	58.49	56.22
KRH66918	Soybean	cytosol	56.17	54.96
AT2G41720.1	Thale cress	cytosol, plastid	54.82	54.62
CDY23832	Canola	plastid	53.6	53.67
Bra004642.1-P	Field mustard	cytosol, plastid	53.11	53.18
Solyc04g015950.1.1	Tomato	plastid	55.19	53.18
CDX79920	Canola	cytosol, plastid	52.99	53.12
KRG95241	Soybean	plastid	39.07	46.99
HORVU2Hr1G035060.2	Barley	cytosol	17.46	22.88
HORVU5Hr1G022350.1	Barley	plastid	12.94	20.62
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	12.09	19.41
HORVU7Hr1G111000.5	Barley	plastid	19.05	19.12
HORVU0Hr1G007320.4	Barley	cytosol	10.5	18.66
HORVU4Hr1G086600.3	Barley	plastid	11.23	18.55
HORVU7Hr1G027800.8	Barley	cytosol	10.5	17.73
HORVU2Hr1G043170.1	Barley	mitochondrion	14.29	17.7
HORVU5Hr1G114630.1	Barley	mitochondrion	16.97	16.69
HORVU6Hr1G075250.5	Barley	plastid	9.89	16.2
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	12.45	15.81
HORVU4Hr1G024360.2	Barley	endoplasmic reticulum, vacuole	10.74	15.22
HORVU3Hr1G114340.4	Barley	mitochondrion	11.6	14.98

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:AK368237	UniProt:F2DWG9	GO:GO:0000003	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009507	GO:GO:0009536	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0010239	EnsemblPlantsGene:HORVU2Hr1G056820	EnsemblPlants:HORVU2Hr1G056820.1	InterPro:IPR002885	InterPro:IPR011990
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFAM:PF17177	InterPro:PPR_long	PFscan:PS51375
PANTHER:PTHR24015	PANTHER:PTHR24015:SF1614	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI00020071D0	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DWG9]

Coordinates

chrchr2H:-:363058501..363131431

Molecular Weight (calculated)

92181.8 Da

IEP (calculated)

8.993

GRAVY (calculated)

-0.166

Length

819 amino acids

Sequence
(BLAST)

001: MSSTTPPPPA SQNPEAPPGV VRLLRRRPPR STGPPPWAKR RPSVSVDYDR GRRTVRVEVD GLGGDALPAR HRLRVEGSRW QRDWKVSQVA ARVLALPRAD
101: PHAVDAVLNC WAGRFARRNF PLLIREMAFS GSLEHAVYVF CWMKNQENYC ARNDIYGMMI QLHARHNQVD QARGLFFEMQ EWRCKPDADI YNSLINAHAR
201: AGLWRWAINI MDDMLRAAIP PSRATYNNVV NACGAAGNWK KALELCKKMI RNGVGPDLVT HNIVLSAFKN GFQYTKATGY FEMMKGANIA PDTFTLNIVI
301: HCLVKVGQHG DAVDLLNSMR EKRVQCSPDV VTYTSIIHSY YVCGQVENCK AVFDMMVAEG VKPNIVSYNA LLGAYASHGM HTEAFGIFKL LKQNGLRPDV
401: VSYTTLLNAY GRSAQPEKAR EVFNEMRKNS CKPNKVSYNA LIDAYGSAGM FKEAISLLHE MEKDGIPPDV VSISTLLAAC GRCRQTTKID TVLEAAKFRG
501: IELNIVAYNS GIGSYLSFGD YEKALKLYAT MMASNVNPDA VTYNILISGL CKLGKYAESL KFFEDMVDLR IPLTKEVYSS LICSYVKQDK LAEAESTFIN
601: MKASGCFPDV LTYTAMIQAY TDHGSWTSVW DLFKEMEGNA ILPDAIICSS LMEALNKGNQ YGRVLQLMKF MHDQCIQLNQ KAYFEIIASC SMLRDWKTAS
701: EIIEHLDSSL PSISVGKLNY LLNFLGKCGK TESMMKLFYK MVSSCSTVGL STYKVLLRNL LAVGKWRKYV EVLQWMEDAG VRPTLYMYQN VLPYIWRDNS
801: MDYVTLMQQK INASREKIT

Best Arabidopsis Sequence Match ( AT2G41720.3 )
(BLAST)

001: MATVTNFKLV TPPESSRADK PGATKASDAF QEKKSVSVNY DRGEHEVSVN IGGLRKADIP RRYRIRVEND RFQKDWSVSE VVDRLMALNR WEEVDGVLNS
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LGEMREECKI NDSVT

Arabidopsis Description

EMB2654EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.