Factsheet for HORVU7Hr1G095190.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G407400.1	Wheat	cytosol	85.49	95.4
TraesCS7B01G307500.2	Wheat	cytosol	95.88	94.22
TraesCS7D01G400900.3	Wheat	cytosol	95.69	94.03
HORVU0Hr1G007320.4	Barley	cytosol	78.82	87.2
Os06t0710800-01	Rice	cytosol	81.76	84.76
OQU77078	Sorghum	mitochondrion	79.61	82.19
Zm00001d014751_P003	Maize	plastid	72.16	69.17
GSMUA_Achr1P10690_001	Banana	cytosol	43.53	67.07
Solyc10g080330.1.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, nucleus	40.39	54.07
VIT_16s0039g02560.t01	Wine grape	cytosol	51.57	53.67
CDY64953	Canola	cytosol	29.22	51.2
KRH27783	Soybean	cytosol, plastid	48.24	47.13
KRH77730	Soybean	plastid	47.84	46.65
CDX74617	Canola	mitochondrion	30.78	44.73
Bra035352.1-P	Field mustard	mitochondrion	41.76	44.19
AT5G36300.2	Thale cress	cytosol	28.43	43.94
PGSC0003DMT400060882	Potato	mitochondrion	44.12	41.36
HORVU2Hr1G043170.1	Barley	mitochondrion	36.08	27.84
HORVU2Hr1G035060.2	Barley	cytosol	21.37	17.44
HORVU7Hr1G027800.8	Barley	cytosol	16.08	16.91
HORVU6Hr1G075250.5	Barley	plastid	16.27	16.6
HORVU4Hr1G086600.3	Barley	plastid	15.88	16.33
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	18.04	14.26
HORVU4Hr1G024360.2	Barley	endoplasmic reticulum, vacuole	14.9	13.15
HORVU7Hr1G111000.5	Barley	plastid	20.78	12.99
HORVU5Hr1G114630.1	Barley	mitochondrion	20.0	12.24
HORVU3Hr1G114340.4	Barley	mitochondrion	15.1	12.15
HORVU2Hr1G056820.1	Barley	plastid	19.41	12.09
HORVU5Hr1G022350.1	Barley	plastid	10.78	10.7

Protein Annotations

EnsemblPlants:HORVU7Hr1G095190.4	EnsemblPlantsGene:HORVU7Hr1G095190	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF483
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B46A13D	UniProt:A0A287XEK8	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:580500870..580503975

Molecular Weight (calculated)

58212.0 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.196

Length

510 amino acids

Sequence
(BLAST)

001: MDACCLVRRH LHPPLQLPPL QRLTLGRRCR HRSVTIAVAF CSTAPDHHRE RPWESYDRDI QPHAGSDLAR SLQLLADMQA AGMRPSAAAY ARLIRALARA
101: GRALEAEALL LEMRHLGLRP DAAHYNALLE GLLARAHLRL ADRLLLQMAD DGVARNRRTY MLLLDAYARA GRLEDSWWVL GEMKRWGIRL DTAGYSTLVR
201: LYRDSGMWKK ATDLIMEMQE VGVELDVKIY NGLIDTFGKY GQLADARKMF EKMRGQGIKP DIETWNALIR WHCRVGNMKR ALRFLAAMQE EGMYPDPKIF
301: ITIINRLGEQ GKWDELKELF DKMRNRGFKE SGAIYAVLVD IYGQYGHFRD AQECVAALKA ENLQLSPSIF CVLANAYAQQ GLCEQTVSVL QLMEAEGIEP
401: NLVMLNLLIN AFSTAGRHLE AQAVFQHIKD SGMSPDVVTY TTLMKAFMRV KRYEKVSEVY SEMERAGCTP DRKAREMLHD ASVTMEQMGC KCFICTFAAV
501: SFWFSRMYWL

Best Arabidopsis Sequence Match ( AT5G36300.2 )
(BLAST)

001: MAPISHTRIS LSMYNSWIRY FCRTGETNEA MSLLAEIHSL GSRPDPLSYV SFIETLASLR RTLEADALFH EVVRFMIYGS YSVRLYNALV SRYLRKEVSW
101: RVVNEMKKRK FRLNSFVYGK IIRIYRDNGM WKKALGIVEE IREIGLPMDV EIYNSVIDTF GKYGELDEEL QVLEKLQRSS DSRPNIRTWN SLIRWHCHHG
201: AVDMALELFT MIFEDIGELV GKLKSQGVAP SANLFCTLAN AYAQQGLCKQ TVKVLKMMEN EGIEPNLIML NVLINAFGTA GKHMEALSIY HHIKETVWIH
301: PDVVTYSTLM KAFTRAKKYE MVCSFYLVTL

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At5g36300 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.