CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0710800-01	Rice	cytosol	83.6	83.94
TraesCS7A01G407400.1	Wheat	cytosol	76.32	82.49
Zm00001d014751_P003	Maize	plastid	85.83	79.7
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	82.19	79.61
TraesCS7B01G307500.2	Wheat	cytosol	81.98	78.03
TraesCS7D01G400900.3	Wheat	cytosol	81.17	77.26
HORVU0Hr1G007320.4	Barley	cytosol	70.24	75.27
GSMUA_Achr1P10690_001	Banana	cytosol	42.71	63.75
VIT_16s0039g02560.t01	Wine grape	cytosol	53.85	54.29
Solyc10g080330.1.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, nucleus	41.3	53.54
CDY64953	Canola	cytosol	31.38	53.26
KRH27783	Soybean	cytosol, plastid	50.81	48.08
KRH77730	Soybean	plastid	49.8	47.04
Bra035352.1-P	Field mustard	mitochondrion	45.14	46.27
CDX74617	Canola	mitochondrion	32.59	45.87
AT5G36300.2	Thale cress	cytosol	29.96	44.85
PGSC0003DMT400060882	Potato	mitochondrion	44.94	40.81
EER99505	Sorghum	plastid	36.44	26.95
KXG40345	Sorghum	plastid	16.8	17.08
EER87934	Sorghum	plastid	17.0	17.07
OQU84443	Sorghum	cytosol	20.65	16.86
OQU86802	Sorghum	cytosol	9.72	15.53
KXG30749	Sorghum	plastid	15.59	15.46
KXG36606	Sorghum	plastid	22.67	14.49
EES13486	Sorghum	plastid	16.4	13.46
EER97871	Sorghum	plastid	15.18	13.39
KXG20531	Sorghum	plastid	20.65	13.14
KXG36530	Sorghum	plastid	20.04	12.09
OQU90703	Sorghum	plastid	21.46	11.82
EES16159	Sorghum	plastid	19.43	11.01

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A1W0VUX6	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:OQU77078	ProteinID:OQU77078	ProteinID:OQU77078.1	ProteinID:OQU77079.1
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF483
InterPro:Pentatricopeptide_repeat	EnsemblPlantsGene:SORBI_3010G260000	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0009DC933E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:59675474..59684491

Molecular Weight (calculated)

55943.1 Da

IEP (calculated)

9.020

GRAVY (calculated)

-0.239

Length

494 amino acids

Sequence
(BLAST)

001: MDACSLVRLH LPRPLQLPLI SPPIPSRRRH RRVASAVVGC CCSAAEADHH QERPWEWYDR AIQSHAGSDL ARSLGLLADM QASGGRPSSG AYARLIRALS
101: RAGRALEAEA LLLEMRRHGP RPDAAHYNAL LEGLLAAAHL RLADRLLLQM ADDGVARNRR TYTLLLGAYA RAGRLEDSWW VLGEMRRRGI RLDTAGYSML
201: VRLYRDNGMW KKAIDLVMEM QEVGVELDVK IYSGLIDTFG KYGQLADARR VFDKMRAEGI KPDISTWNAL IQWHCRVGNM KRALRFFTSM QEEGMYPDPK
301: IFVMIISRLG EQGKWDEIKK LFDGMKNRGF KESGAVYAVL VDIYGQYGHF RDARECIAAL RAENMQLSPR VFCVLANAYA QQGLCEQTVN VLQLMEEEGF
401: EPNLVMLNLL INAFGTAGRH LEALAVFQHI KDSGMSPDVV TYTTLMKTFM RAKKFEKVSE VYREMERAGC TPDRKAREML HDATVVLEQR GCIY

Best Arabidopsis Sequence Match ( AT5G42310.1 )
(BLAST)

001: MLLLQQPPLV STRFHSLYFL THHHHHHHRF FQPPISAFSA TTSASLPSPS PSSSSSYFSS WNGLDTNEEE DNEFSSEVHR RYDFSPLLKF LSRFGPVELA
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS

Arabidopsis Description

CRP1Pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L844]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.