Factsheet for HORVU0Hr1G007320.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	87.2	78.82
TraesCS7A01G407400.1	Wheat	cytosol	77.44	78.12
TraesCS7B01G307500.2	Wheat	cytosol	84.38	74.95
TraesCS7D01G400900.3	Wheat	cytosol	83.95	74.57
Os06t0710800-01	Rice	cytosol	77.66	72.76
OQU77078	Sorghum	mitochondrion	75.27	70.24
GSMUA_Achr1P10690_001	Banana	cytosol	45.77	63.75
Zm00001d014751_P003	Maize	plastid	67.9	58.83
Solyc10g080330.1.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, nucleus	43.6	52.76
VIT_16s0039g02560.t01	Wine grape	cytosol	52.71	49.59
CDY64953	Canola	cytosol	30.8	48.8
KRH27783	Soybean	cytosol, plastid	49.46	43.68
KRH77730	Soybean	plastid	48.37	42.64
AT5G36300.2	Thale cress	cytosol	29.72	41.52
Bra035352.1-P	Field mustard	mitochondrion	42.95	41.08
CDX74617	Canola	mitochondrion	31.02	40.74
PGSC0003DMT400060882	Potato	mitochondrion	45.55	38.6
HORVU2Hr1G043170.1	Barley	mitochondrion	36.44	25.42
HORVU7Hr1G027800.8	Barley	cytosol	17.79	16.91
HORVU2Hr1G035060.2	Barley	cytosol	22.56	16.64
HORVU6Hr1G075250.5	Barley	plastid	16.92	15.6
HORVU4Hr1G086600.3	Barley	plastid	16.49	15.32
HORVU6Hr1G032270.20	Barley	cytosol, mitochondrion	18.22	13.02
HORVU7Hr1G111000.5	Barley	plastid	22.99	12.99
HORVU4Hr1G024360.2	Barley	endoplasmic reticulum, vacuole	16.05	12.8
HORVU3Hr1G114340.4	Barley	mitochondrion	15.18	11.04
HORVU5Hr1G114630.1	Barley	mitochondrion	19.74	10.92
HORVU2Hr1G056820.1	Barley	plastid	18.66	10.5
HORVU5Hr1G022350.1	Barley	plastid	9.54	8.56

Protein Annotations

EnsemblPlants:HORVU0Hr1G007320.4	EnsemblPlantsGene:HORVU0Hr1G007320	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF483	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	SEG:seg
SUPFAM:SSF48452	TIGRFAMs:TIGR00756	UniParc:UPI000B46A338	UniProt:A0A287DX97	MapMan:35.1	:

Description

No Description!

Coordinates

chrchrUn:-:41944388..41947383

Molecular Weight (calculated)

47239.4 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.228

Length

461 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXRIDLSYQG SVKQVYGTHS SNXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXRALA RAGRALEAEA LLLEMRHLGL RPDAAHYNAL
101: LEGLLARAHL RLADRLLLQM ADDGVARNRR TYMLLLDAYA RAGRLEDSWW VLGEMKRWGI RLDTAGYSTL VRLYRDSGMW KKATDLIMEM QEVGVELDVK
201: IYNGLIDTFG KYGQLADARK MFEKMRGQGI KPDIETWNAL IRWHCRVGNM KRALRFLAAM QEEGMYPDPK IFITIINRLG EQGKWDELKE LFDKMRNRGF
301: KESGAIYAVL VDIYGQYGHF RDAQECVAAL KAENLQLSPS IFCVLANAYA QQGLCEQTVS VLQLMEAEGI EPNLVMLNLL INAFSTAGRH LEAQAVFQHI
401: KDSGMSPDVV TYTTLMKAFM RVKRYEKVSE VYSEMERAGC TPDRKAREML HDASVTMEQM G

Best Arabidopsis Sequence Match ( AT5G36300.1 )
(BLAST)

001: MSLLAEIHSL GSRPDPLSYV SFIETLASLR RTLEADALFH EVVRFMIYGS YSVRLYNALV SRYLRKEVSW RVVNEMKKRK FRLNSFVYGK IIRIYRDNGM
101: WKKALGIVEE IREIGLPMDV EIYNSVIDTF GKYGELDEEL QFGSFEDIGE LVGKLKSQGV APSANLFCTL ANAYAQQGLC KQTVKVLKMM ENEGIEPNLI
201: MLNVLINAFG TAGKHMEALS IYHHIKETVW IHPDVVTYST LMKAFTRAKK YEMVCSRNIQ GNGSFWVYNR SESKTIIAKC YYGS

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At5g36300 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.