Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G486300.1 | Wheat | plastid | 97.36 | 93.33 |
| TraesCS5D01G500300.1 | Wheat | plastid | 97.24 | 93.1 |
| TraesCS5B01G500100.1 | Wheat | plastid | 97.72 | 92.61 |
| Os03t0824100-01 | Rice | plastid | 85.47 | 82.03 |
| Zm00001d022599_P002 | Maize | plastid | 84.15 | 78.41 |
| OQU90703 | Sorghum | plastid | 84.27 | 78.26 |
| GSMUA_Achr1P18290_001 | Banana | cytosol | 48.26 | 60.54 |
| CDX73117 | Canola | plastid | 51.74 | 49.94 |
| Bra015889.1-P | Field mustard | plastid | 51.38 | 49.54 |
| CDY45398 | Canola | plastid | 51.38 | 49.54 |
| AT1G74850.1 | Thale cress | plastid | 50.9 | 49.19 |
| KRH03384 | Soybean | nucleus | 50.42 | 48.89 |
| KRH56998 | Soybean | nucleus | 50.3 | 48.83 |
| VIT_17s0000g07500.t01 | Wine grape | plastid | 50.54 | 48.45 |
| PGSC0003DMT400063174 | Potato | plastid | 49.82 | 48.26 |
| Solyc03g113630.2.1 | Tomato | nucleus | 49.34 | 47.79 |
| HORVU7Hr1G027800.8 | Barley | cytosol | 12.97 | 22.27 |
| HORVU2Hr1G035060.2 | Barley | cytosol | 16.57 | 22.08 |
| HORVU2Hr1G043170.1 | Barley | mitochondrion | 16.09 | 20.27 |
| HORVU7Hr1G095190.4 | Barley | mitochondrion, plastid | 12.24 | 20.0 |
| HORVU0Hr1G007320.4 | Barley | cytosol | 10.92 | 19.74 |
| HORVU5Hr1G022350.1 | Barley | plastid | 12.12 | 19.65 |
| HORVU7Hr1G111000.5 | Barley | plastid | 18.01 | 18.38 |
| HORVU6Hr1G032270.20 | Barley | cytosol, mitochondrion | 13.33 | 17.21 |
| HORVU2Hr1G056820.1 | Barley | plastid | 16.69 | 16.97 |
| HORVU6Hr1G075250.5 | Barley | plastid | 9.96 | 16.6 |
| HORVU4Hr1G086600.3 | Barley | plastid | 9.84 | 16.53 |
| HORVU4Hr1G024360.2 | Barley | endoplasmic reticulum, vacuole | 11.4 | 16.44 |
| HORVU3Hr1G114340.4 | Barley | mitochondrion | 11.4 | 14.98 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:15.6.1.2.2.2 | UniProt:A0A287STL3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009295 | GO:GO:0009507 | GO:GO:0009508 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0042793 | GO:GO:0045893 | EnsemblPlantsGene:HORVU5Hr1G114630 | EnsemblPlants:HORVU5Hr1G114630.1 |
| InterPro:IPR002625 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 |
| PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF726 | InterPro:Pentatricopeptide_repeat | SMART:SM00463 |
| SUPFAM:SSF48452 | InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B4686ED | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:644373416..644378405
Molecular Weight (calculated)
92266.0 Da
IEP (calculated)
5.480
GRAVY (calculated)
-0.189
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: RPAVLARARG QLTATPKEDA APAAAGAGER GRYSYEVDSL IDRLSNLAPR GSIARCLETA KHRLTLQDFA AVYREFSRRG DWQRSMRLFK YMQRQSWCRP
101: DEHIHAIVIG VLGRQGPALL DKCLEVFQDL PADARTALSY TSLIAAYARN ALHDDARALL DQMKAHGVAP TAATYNTVLA ACARAADPPV PFDMLLGLFA
201: EMRHDPSPAV RPDLTTYNTL LAAAAVRSLS DQSEMLLHTM LEAGIMPDNA SYRYIVDAFA NAGDLSRVAE LFREMADTGH TPDPSAYLGL MEAHTRIGAT
301: AEAVAVLRQM QADGCAPTAA TYRVLLDQYG KQGRFDGVRE LFREMRTAVP PDTATYNVLF NVFGDGGFFK EVVELFHDML RTGIEPDMET CEGVLAACGQ
401: GGLHEDAREV LDYITKEGMV PTAKAYTGLI EALGHAAMYE EAYVAFNMMT EIGSLPTIET YNSLANVFAK GGLFREAESV FSRMTNSAGI QKSKDSYDAL
501: IEAYCQGSQL DDAVKAYMEM RKSRFNPDER SLEGVLNAYC IAGVIDESKE QFEEIRSNMA VPSIIAYCMM LSLYARNDRW ADAYDLLEEM KTNRASNTHQ
601: VIASMIKGEY DDSSNWQMVE YVLDSSNLEG CDYSLRFFNA LLDVLWWFGQ KARAARVLDH AVSYGLFPEL FRDTKLVWSL DVHRMSVGGA LVAVSVWLNK
701: LYARVKREKD LPQLASVVVL RGEMEKSTVT RGLPISKVVY SFLNDTLSAS FHYPKWNKGR VICLKSQLKK LQAAIDSSNG AAIPGFVHMT DSRLPPPGSK
801: VYTREQPQVE NGSAHSAAES LVEEEKESEL LAL
101: DEHIHAIVIG VLGRQGPALL DKCLEVFQDL PADARTALSY TSLIAAYARN ALHDDARALL DQMKAHGVAP TAATYNTVLA ACARAADPPV PFDMLLGLFA
201: EMRHDPSPAV RPDLTTYNTL LAAAAVRSLS DQSEMLLHTM LEAGIMPDNA SYRYIVDAFA NAGDLSRVAE LFREMADTGH TPDPSAYLGL MEAHTRIGAT
301: AEAVAVLRQM QADGCAPTAA TYRVLLDQYG KQGRFDGVRE LFREMRTAVP PDTATYNVLF NVFGDGGFFK EVVELFHDML RTGIEPDMET CEGVLAACGQ
401: GGLHEDAREV LDYITKEGMV PTAKAYTGLI EALGHAAMYE EAYVAFNMMT EIGSLPTIET YNSLANVFAK GGLFREAESV FSRMTNSAGI QKSKDSYDAL
501: IEAYCQGSQL DDAVKAYMEM RKSRFNPDER SLEGVLNAYC IAGVIDESKE QFEEIRSNMA VPSIIAYCMM LSLYARNDRW ADAYDLLEEM KTNRASNTHQ
601: VIASMIKGEY DDSSNWQMVE YVLDSSNLEG CDYSLRFFNA LLDVLWWFGQ KARAARVLDH AVSYGLFPEL FRDTKLVWSL DVHRMSVGGA LVAVSVWLNK
701: LYARVKREKD LPQLASVVVL RGEMEKSTVT RGLPISKVVY SFLNDTLSAS FHYPKWNKGR VICLKSQLKK LQAAIDSSNG AAIPGFVHMT DSRLPPPGSK
801: VYTREQPQVE NGSAHSAAES LVEEEKESEL LAL
001: MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
Arabidopsis Description
PTAC2PTAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.