Factsheet for TraesCS5B01G500100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G486300.1	Wheat	plastid	97.38	98.5
TraesCS5D01G500300.1	Wheat	plastid	97.38	98.39
HORVU5Hr1G114630.1	Barley	mitochondrion	92.61	97.72
Os03t0824100-01	Rice	plastid	84.41	85.48
Zm00001d022599_P002	Maize	plastid	82.71	81.32
OQU90703	Sorghum	plastid	82.94	81.27
GSMUA_Achr1P18290_001	Banana	cytosol	45.28	59.94
CDX73117	Canola	plastid	49.37	50.29
Bra015889.1-P	Field mustard	plastid	49.15	50.0
CDY45398	Canola	plastid	49.03	49.88
AT1G74850.1	Thale cress	plastid	48.69	49.65
VIT_17s0000g07500.t01	Wine grape	plastid	48.81	49.37
KRH56998	Soybean	nucleus	48.12	49.3
KRH03384	Soybean	nucleus	48.12	49.24
PGSC0003DMT400063174	Potato	plastid	47.67	48.72
Solyc03g113630.2.1	Tomato	nucleus	47.21	48.26
TraesCS7B01G033900.1	Wheat	plastid	12.86	22.29
TraesCS7B01G401800.2	Wheat	plastid	19.0	20.49
TraesCS7B01G307500.2	Wheat	cytosol	11.83	20.04
TraesCS2B01G238300.1	Wheat	plastid	15.24	20.03
TraesCS2B01G212000.1	Wheat	plastid	17.98	19.87
TraesCS5B01G091600.1	Wheat	plastid	19.34	19.81
TraesCS4B01G138200.1	Wheat	cytosol, mitochondrion, plastid	11.15	18.6
TraesCS2B01G269700.1	Wheat	plastid	16.72	18.01
TraesCS6B01G332800.1	Wheat	plastid	11.04	17.14
TraesCS4B01G359900.1	Wheat	plastid	9.44	16.5
TraesCS6B01G186300.2	Wheat	cytosol, mitochondrion	10.92	15.31

Protein Annotations

Gene3D:1.25.40.10	MapMan:15.6.1.2.2.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009536	GO:GO:0009987
GO:GO:0042793	GO:GO:0045893	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535
PFAM:PF13041	PFAM:PF17177	InterPro:PPR_long	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF726	InterPro:Pentatricopeptide_repeat	SMART:SM00463	InterPro:Smr_dom	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
EnsemblPlantsGene:TraesCS5B01G500100	EnsemblPlants:TraesCS5B01G500100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:666202212..666206894

Molecular Weight (calculated)

97050.5 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.204

Length

879 amino acids

Sequence
(BLAST)

001: MALVSTTTVA SSSSYSYHYD HPLRPVAARS WCRPRSRGGG GGGGRLAVLA RARGQLTTTP KEEAAPAAAG AGERGRYSYE VDSLIDRLSN LAPRGSIARC
101: LETAKHRLTL QDFAAVYREF SRRGDWQRSV RLFKYMQRQS WCRPDEHIHA IVIGVLGRQG PALLDKCLEV FQDLPADART ALSYTSLIAA YARNALHDDA
201: RALLDQMKAQ GVAPTAATYN TVLAACARAA DPPVPFDMLL GLFAEMRHDP SPAVRPDLTT YNTLLAAAAV RALSDQSEML LRTMLEAGII PDTASYRYIV
301: DAFANAGDLS RVAELFREMA DTGHTPDPSA YLGLMEAHTR IGATAEAVAV LRQMQADGCA PTAATYRVLL DQYGKQGRFD GVRELFREMR TAVPPDTATY
401: NVLFNVFGDG GFFKEVVELF HDMLRTGIEP DMETCEGVLA ACGQGGLHED AREVLDYITK EGMVPTAKAY TGLIEALGHA AMYEEAYVAF NMMTEIGSLP
501: TIETYNSLAN VFAKGGLFRE AESVFSRMTN SAGIQKSKDS YDALIEAYCQ GSQLDDAVKA YMEMRKSRFN PDERSLEGVL NAYCIAGVID ESKEQFEEIR
601: SNMTVPSIIA YCMMLSLYAR NDRWADAYDL LEEMKANRAS NTHQVIASMI KGEYDNSSNW QMVEYVLDSS NLEGCDYSLR FFNSLLDVLW WFGQKARAAR
701: VLDHAVSYGL FPELSRDTKL VWSLDVHRMS VGGALVAVSV WLNKLYTRLK REKDLPQLAS VVVLRGEMEK STVTRGLPIS KVVYSFLNDT LSASFHYPKW
801: NKGRVICLKS QLKKLQAAID SSNGAAVPGF VHMTDSRLPS PGSKVYTREP QVENGSAHAH STAESLVEEE EKESELLAL

Best Arabidopsis Sequence Match ( AT1G74850.1 )
(BLAST)

001: MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA

Arabidopsis Description

PTAC2PTAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.