Factsheet for TraesCS7B01G033900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G133100.1	Wheat	plastid	96.84	96.65
HORVU7Hr1G027800.8	Barley	cytosol	86.0	89.9
Os06t0172000-01	Rice	plastid	85.01	84.34
EER87934	Sorghum	plastid	79.29	81.71
Zm00001d037476_P001	Maize	plastid	77.91	80.28
VIT_07s0005g06720.t01	Wine grape	cytosol	52.47	67.17
GSMUA_Achr1P15160_001	Banana	plastid	64.5	66.6
KRH46714	Soybean	plastid	60.95	60.0
PGSC0003DMT400082022	Potato	plastid	57.59	59.84
Solyc01g006500.2.1	Tomato	plastid	57.59	59.84
AT5G48730.1	Thale cress	plastid	58.78	58.66
CDX86283	Canola	plastid	58.58	58.46
CDX85360	Canola	plastid	58.19	58.42
Bra037464.1-P	Field mustard	plastid	58.78	55.7
TraesCS4B01G359900.1	Wheat	plastid	34.71	34.99
TraesCS4B01G138200.1	Wheat	cytosol, mitochondrion, plastid	34.12	32.83
TraesCS6B01G332800.1	Wheat	plastid	21.1	18.9
TraesCS7B01G307500.2	Wheat	cytosol	16.37	15.99
TraesCS2B01G212000.1	Wheat	plastid	24.26	15.47
TraesCS7B01G401800.2	Wheat	plastid	22.68	14.11
TraesCS2B01G238300.1	Wheat	plastid	18.54	14.05
TraesCS5B01G500100.1	Wheat	plastid	22.29	12.86
TraesCS6B01G186300.2	Wheat	cytosol, mitochondrion	14.2	11.48
TraesCS2B01G269700.1	Wheat	plastid	18.34	11.4
TraesCS5B01G091600.1	Wheat	plastid	19.13	11.31

Protein Annotations

EnsemblPlants:TraesCS7B01G033900.1	EnsemblPlantsGene:TraesCS7B01G033900	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF664	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:33547428..33549520

Molecular Weight (calculated)

57525.3 Da

IEP (calculated)

8.855

GRAVY (calculated)

-0.408

Length

507 amino acids

Sequence
(BLAST)

001: MAAAPVASPF PTLPSPSSAL STPTRRLHGR AFPPPAAAAS PREQQQQQSA RGAAGAGESR RRREEEQDEA AAEEFERQRK EEVNRKIASR KALSIILRRE
101: ATKAVLDKRE PGKGTRRLLP RTVLEALHDR VAALRWESAL KVFELMRDQV WYRPYVGIYI KLITMLGKCK QPGKAHELFQ AMVDEGCAPN LESYTALVSA
201: YSRSGSFDRA FALLDQMKAT PGCRPDVQTY SILIKSCLHA HDFDKVKDLL EDMARAGIRP NTVTYNTLID AHGKAGRFAE MESTLLEMLS EDCKPDVWTM
301: NSTLRAFGSS GQIETMESCY EKFQASGISP NIKTYNILLD SYGKAKMYEK MGAVMEYMQK YYYSWTIVTY NVVIDAFGRA GDLEQMEYIF RLMKSDRIKP
401: NCVTLCSLIR AYGRADQVKK IETVLRVVEN SDITLDIVFF NCLVDAYGRV GRLAEMWDVL NMMKEEQIRP DKVTCTTMIK WFLVKGIDDH RVQYLRDLKD
501: GRSTDNK

Best Arabidopsis Sequence Match ( AT5G48730.1 )
(BLAST)

001: MVSLSTSTSH APPLPTNRRT AERTFTVRCI SISPREPNYA ITSDKSNNTS LSLRETRQSK WLINAEDVNE RDSKEIKEDK NTKIASRKAI SIILRREATK
101: SIIEKKKGSK KLLPRTVLES LHERITALRW ESAIQVFELL REQLWYKPNV GIYVKLIVML GKCKQPEKAH ELFQEMINEG CVVNHEVYTA LVSAYSRSGR
201: FDAAFTLLER MKSSHNCQPD VHTYSILIKS FLQVFAFDKV QDLLSDMRRQ GIRPNTITYN TLIDAYGKAK MFVEMESTLI QMLGEDDCKP DSWTMNSTLR
301: AFGGNGQIEM MENCYEKFQS SGIEPNIRTF NILLDSYGKS GNYKKMSAVM EYMQKYHYSW TIVTYNVVID AFGRAGDLKQ MEYLFRLMQS ERIFPSCVTL
401: CSLVRAYGRA SKADKIGGVL RFIENSDIRL DLVFFNCLVD AYGRMEKFAE MKGVLELMEK KGFKPDKITY RTMVKAYRIS GMTTHVKELH GVVESVGEAQ
501: VVVKKPDF

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FKC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.