Factsheet for TraesCS5A01G486300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G500300.1	Wheat	plastid	98.39	98.28
TraesCS5B01G500100.1	Wheat	plastid	98.5	97.38
HORVU5Hr1G114630.1	Barley	mitochondrion	93.33	97.36
Os03t0824100-01	Rice	plastid	84.7	84.79
OQU90703	Sorghum	plastid	83.77	81.16
Zm00001d022599_P002	Maize	plastid	83.43	81.1
GSMUA_Achr1P18290_001	Banana	cytosol	46.03	60.24
CDX73117	Canola	plastid	50.17	50.52
Bra015889.1-P	Field mustard	plastid	49.94	50.23
CDY45398	Canola	plastid	49.83	50.12
AT1G74850.1	Thale cress	plastid	49.6	50.0
KRH56998	Soybean	nucleus	49.02	49.65
VIT_17s0000g07500.t01	Wine grape	plastid	49.6	49.6
KRH03384	Soybean	nucleus	49.02	49.59
PGSC0003DMT400063174	Potato	plastid	48.45	48.95
Solyc03g113630.2.1	Tomato	nucleus	48.1	48.6
TraesCS2A01G194800.1	Wheat	endoplasmic reticulum, extracellular	13.58	25.38
TraesCS7A01G407400.1	Wheat	cytosol	11.97	22.76
TraesCS7A01G133100.1	Wheat	plastid	13.12	22.44
TraesCS7A01G495500.1	Wheat	plastid	18.76	20.1
TraesCS5A01G085800.1	Wheat	plastid	19.68	19.93
TraesCS6A01G303300.1	Wheat	plastid	11.16	17.96
TraesCS4A01G178100.5	Wheat	plastid	11.16	17.93
TraesCS2A01G239500.2	Wheat	plastid	17.15	17.45
TraesCS5A01G528400.1	Wheat	plastid	10.13	16.42
TraesCS3A01G523700.1	Wheat	plastid	11.05	15.79
TraesCS6A01G163600.2	Wheat	nucleus	10.93	15.06
TraesCS5A01G486200.1	Wheat	cytosol	0.92	8.51

Protein Annotations

Gene3D:1.25.40.10	MapMan:15.6.1.2.2.2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009536
GO:GO:0009987	GO:GO:0042793	GO:GO:0045893	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF726	InterPro:Pentatricopeptide_repeat	SMART:SM00463	SUPFAM:SSF48452	InterPro:Smr_dom	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS5A01G486300	EnsemblPlants:TraesCS5A01G486300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:657201072..657205353

Molecular Weight (calculated)

96242.7 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.200

Length

869 amino acids

Sequence
(BLAST)

001: MALVSTTTVA SSSSYHCDHP LRPAAARSWC RPRSRVGGRL AVLARARGQL TTTPKEEAAP PAGAGERGRY SYEVDSLIDR LSNLAPRGSI ARCLETAKHR
101: LTLQDFAAVY REFSRRGDWQ RSVRLFKYMQ RQSWCRPDEH IHAIVIGVLG RQGPALLDKC LEVFQDFPAD ARTALSYTSL IAAYARNALH EDARALLDQM
201: KAQGVAPTAA TYNTVLAACA RAADPPVPFD MLLGLFAEMR HDPSPAVRPD LTTYNTLLAA AAVRSLSDQS EMLLRTMLEA GIMPDTASYR YIVDAFANAC
301: DLSRVAELFR EMADTGHTPD PSAYLGLMEA HTRIGATAEA VAVLRQMQAD GCAPTAATYR VLLDQYGKQG RFDGVRELFR EMRTAVPPDT ATYNVLFNVF
401: GDGGFFKEVV ELFHDMLRTG IEPDMETCEG VLAACGQGGL HEDAREVLDY ITKEGMVPTA KAYTGLIEAL GHAAMYEEAY VAFNMMTEIG SLPTIETYNS
501: LANVFAKGGL FREAESVFSR MTNSAGIQKS KDSYDALIEA YCQGSQLDDA VKAYMEMRKS RFNPDERSLE GVLNAYCIAG VIDESKEQFE EIRSKMTVPS
601: IIAYCMMLSL YARNDRWADA YDLLEEMKAN RASNTHQVIA SMIKGEYDDS SNWQMVEYVL DSSNLEGCDY SLRFFNALLD ALWWFGQKAR AARVLDHAVS
701: YGLFPELSRD TKLVWSLDVH RMSVGGALVA VSVWLNKLYT RLKREKDLPQ LASVVVLRGE MEKSTVTRGL PISKVVYSFL NDTLSASFHY PKWNKGRVIC
801: LKSQLKKLQA AIDSSNGAAV PGFVHMTDSR LPSPGSKVYT REPQVENGSA HSTAESLVEE EKESELLAL

Best Arabidopsis Sequence Match ( AT1G74850.1 )
(BLAST)

001: MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA

Arabidopsis Description

PTAC2PTAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.