Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G054500.1 | Wheat | cytosol, plastid | 97.37 | 96.89 |
| TraesCS3D01G529200.1 | Wheat | plastid | 97.2 | 96.73 |
| HORVU3Hr1G114340.4 | Barley | mitochondrion | 96.05 | 92.11 |
| Os08t0191900-01 | Rice | plastid | 81.58 | 81.44 |
| EES13486 | Sorghum | plastid | 80.26 | 81.06 |
| Zm00001d024248_P001 | Maize | plastid | 78.29 | 79.33 |
| CDY06027 | Canola | plastid | 55.76 | 63.84 |
| PGSC0003DMT400041148 | Potato | plastid | 60.03 | 63.81 |
| VIT_12s0028g01140.t01 | Wine grape | cytosol | 56.74 | 62.96 |
| CDX71917 | Canola | plastid | 56.41 | 62.94 |
| Solyc07g043600.2.1 | Tomato | nucleus | 59.87 | 62.76 |
| KRH36131 | Soybean | plastid | 55.59 | 61.12 |
| KRG90623 | Soybean | nucleus | 55.76 | 60.32 |
| AT3G59040.2 | Thale cress | endoplasmic reticulum | 55.92 | 57.63 |
| CDX98345 | Canola | cytosol | 24.67 | 48.23 |
| GSMUA_Achr8P07220_001 | Banana | cytosol | 68.59 | 38.33 |
| TraesCS7A01G133100.1 | Wheat | plastid | 16.78 | 20.08 |
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 14.64 | 19.14 |
| TraesCS7A01G407400.1 | Wheat | cytosol | 12.66 | 16.85 |
| TraesCS4A01G178100.5 | Wheat | plastid | 14.64 | 16.45 |
| TraesCS5A01G528400.1 | Wheat | plastid | 14.31 | 16.23 |
| TraesCS6A01G303300.1 | Wheat | plastid | 13.65 | 15.37 |
| TraesCS6A01G163600.2 | Wheat | nucleus | 15.79 | 15.21 |
| TraesCS7A01G495500.1 | Wheat | plastid | 17.27 | 12.95 |
| TraesCS5A01G085800.1 | Wheat | plastid | 16.28 | 11.54 |
| TraesCS2A01G239500.2 | Wheat | plastid | 16.12 | 11.48 |
| TraesCS5A01G486300.1 | Wheat | plastid | 15.79 | 11.05 |
| TraesCS5A01G486200.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G523700.1 | EnsemblPlantsGene:TraesCS3A01G523700 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF722 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | SEG:seg | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | MapMan:16.12.4.6 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:739143802..739147844
Molecular Weight (calculated)
69033.1 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.580
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAMGTLGS QSPLSFSSSL CNAKASCGWP VYNVKKLEGS QRLDVVCHGM LAPRKFVHKK REEEVFKDAD DEAKQKNWRR MMSEIEESGS AVSSILKTQR
101: NTTGTLPRDT VLGTLVRFKQ LKKWNLVSEI LEWLRTQHWW DFSEMDFLML VTAYGKLGEF SRAERVLKYM NKKGYRPTVI SQTALMEAYG RAKQYRKAEA
201: VFHKMQTSGP EPSPITYQII LKSLVEGDKY KEAEAIFEDL LNEKRASFKP DQKMFHMMIY MYKKAGDYTQ ARKLFAQMPE RGVPQSTVTF NSLMSFEADY
301: KEVSSIYDQM QRAGLKPDVV SYSLLIKAYG KARREDEALA VFEEMLDAGI RPTRKSYNIL LDAFAVSGLV EEARTVFKTM RRHRVEPDLC SYTTMLLAYV
401: NASDMDGAEK FFRRIKDDGL RPNVVAYGTL MKGYSKLDDV EKVMRVYERM RMQGVEPNQT IFTTIMDAHG RNSDFGNAVI WFNEMETRGY PPDKKAKNIL
501: LSLAKTPEEQ EEANELTGNG AVQLEVKPNG MPSGLGTNGA DVDEAGLTDS TAHHHSLNGA STSDLNGRNK AGSSGFEDED DDDDYEELDD EELDFVSFKD
601: KRELNFAT
101: NTTGTLPRDT VLGTLVRFKQ LKKWNLVSEI LEWLRTQHWW DFSEMDFLML VTAYGKLGEF SRAERVLKYM NKKGYRPTVI SQTALMEAYG RAKQYRKAEA
201: VFHKMQTSGP EPSPITYQII LKSLVEGDKY KEAEAIFEDL LNEKRASFKP DQKMFHMMIY MYKKAGDYTQ ARKLFAQMPE RGVPQSTVTF NSLMSFEADY
301: KEVSSIYDQM QRAGLKPDVV SYSLLIKAYG KARREDEALA VFEEMLDAGI RPTRKSYNIL LDAFAVSGLV EEARTVFKTM RRHRVEPDLC SYTTMLLAYV
401: NASDMDGAEK FFRRIKDDGL RPNVVAYGTL MKGYSKLDDV EKVMRVYERM RMQGVEPNQT IFTTIMDAHG RNSDFGNAVI WFNEMETRGY PPDKKAKNIL
501: LSLAKTPEEQ EEANELTGNG AVQLEVKPNG MPSGLGTNGA DVDEAGLTDS TAHHHSLNGA STSDLNGRNK AGSSGFEDED DDDDYEELDD EELDFVSFKD
601: KRELNFAT
001: MFFSFRLLKV LVFHLQIRPC VLLCVSQRKL QNNIINVGVK IQNRFRVVCM GMLAPRKFLQ KRRKMEVFKD AADETDQKRW RGLMLEIEST GSAVPVLRQY
101: KTDGDQGLPR DLVLGTLVRF KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN VISYTALMES YGRGGKCNNA
201: EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301: SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA
401: YVNASDMEGA EKFFKRIKVD GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA LGWYKEMESC GVPPDQKAKN
501: VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL
101: KTDGDQGLPR DLVLGTLVRF KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN VISYTALMES YGRGGKCNNA
201: EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301: SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA
401: YVNASDMEGA EKFFKRIKVD GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA LGWYKEMESC GVPPDQKAKN
501: VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J741]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.