Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G486300.1 | Wheat | plastid | 8.51 | 0.92 |
| TraesCS7A01G495500.1 | Wheat | plastid | 4.26 | 0.49 |
| TraesCS5A01G528400.1 | Wheat | plastid | 2.13 | 0.37 |
| TraesCS2A01G239500.2 | Wheat | plastid | 3.19 | 0.35 |
| TraesCS5A01G085800.1 | Wheat | plastid | 3.19 | 0.35 |
| TraesCS4A01G178100.5 | Wheat | plastid | 1.06 | 0.18 |
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| TraesCS3A01G523700.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS6A01G163600.2 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS6A01G303300.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS7A01G133100.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS7A01G407400.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G486200.1 | EnsemblPlantsGene:TraesCS5A01G486200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0008274 | GO:GO:0033566 | InterPro:MZT1 | PANTHER:PTHR28520 |
| PFAM:PF12554 | SEG:seg | MapMan:13.3.3.1.1 | MapMan:20.1.2.2.10 | : | : |
Description
No Description!
Coordinates
chr5A:-:657198876..657199160
Molecular Weight (calculated)
9599.4 Da
IEP (calculated)
4.605
GRAVY (calculated)
0.050
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MGMEESAGGA ARQAKESLEL AFQMSQILDT GLDRHTLSLL MALCDRGANP EALAALVREL SSAAPPSAAA TAPASNTTAA PATPSLFPSG FRQL
1: MDEEASRTAR ESLELVFRMS NILDTGLDRH TLSVLIALCD LGVNPEALAT VVKELRRESI PDSVTTTPSI H
Arabidopsis Description
GIP1Mitotic-spindle organizing protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M0N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.