Factsheet for TraesCS2A01G239500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G269700.1	Wheat	plastid	92.62	96.94
TraesCS2D01G244500.3	Wheat	plastid	94.03	95.82
HORVU2Hr1G056820.1	Barley	plastid	89.7	93.53
KXG36530	Sorghum	plastid	78.22	81.56
Os07t0213300-01	Rice	cytosol	63.0	79.47
Zm00001d021871_P002	Maize	plastid	74.12	78.63
GSMUA_Achr7P21150_001	Banana	cytosol, plastid	57.38	58.47
VIT_08s0007g08590.t01	Wine grape	cytosol	54.8	54.93
KRH66918	Soybean	cytosol	53.28	54.36
AT2G41720.1	Thale cress	cytosol, plastid	51.29	53.28
CDY23832	Canola	plastid	50.47	52.69
Bra004642.1-P	Field mustard	cytosol, plastid	50.12	52.32
CDX79920	Canola	cytosol, plastid	50.0	52.26
Solyc04g015950.1.1	Tomato	plastid	51.99	52.24
KRG95241	Soybean	plastid	36.89	46.26
TraesCS2A01G194800.1	Wheat	endoplasmic reticulum, extracellular	13.7	25.16
TraesCS7A01G495500.1	Wheat	plastid	20.37	21.45
TraesCS7A01G407400.1	Wheat	cytosol	10.42	19.47
TraesCS7A01G133100.1	Wheat	plastid	11.12	18.7
TraesCS5A01G486300.1	Wheat	plastid	17.45	17.15
TraesCS6A01G303300.1	Wheat	plastid	10.77	17.04
TraesCS5A01G085800.1	Wheat	plastid	16.98	16.9
TraesCS5A01G528400.1	Wheat	plastid	10.54	16.79
TraesCS3A01G523700.1	Wheat	plastid	11.48	16.12
TraesCS4A01G178100.5	Wheat	plastid	10.07	15.9
TraesCS6A01G163600.2	Wheat	nucleus	10.89	14.74
TraesCS5A01G486200.1	Wheat	cytosol	0.35	3.19

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010239
InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFAM:PF13812
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1614	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS2A01G239500	EnsemblPlants:TraesCS2A01G239500.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:332007313..332040851

Molecular Weight (calculated)

96036.0 Da

IEP (calculated)

8.254

GRAVY (calculated)

-0.189

Length

854 amino acids

Sequence
(BLAST)

001: MSSATPPPPA SPNPEAPPRV VRPPPRRSPR SPGPPLWAKR RPSVSVDYDR GRRTVRVEVD GVGADALPAR HRLRVEGSRW QRDCKVSQVA ARVLALPRAD
101: THAVDAVLNC WAGRFACRNF PLLIREMAFS GSLQHAVYVF CWMKNQENYC ARNDIYGMMI RLHARHNQVD QARGLFFEMQ EWRCKPDADI YNSLINAHAR
201: AGLWRWAINI MDDMLRAAIP PSRATYNNVI NACGAAGNWK KALELCKKMI RNGVGPDLVT HNIVLSAFKN GSQYSEAIGY FDMMKGANIA PDTFTLNIVI
301: HCLVKAGQHG DAVDLLNSMR EKRAQCPPDV VTYTSIMHSY YVCGQVKNCK AVFDMMVAEG VKPNIVSYNA LLGAYASHGM HTEALGFFKL LKQNGLRPDV
401: VSYTTLLNAY GRSAQPEKAR EVFNEMRKNS CKPNKVSYNA LIDAYGSAGM FKEAISLLHE MEKDGIPPDV VSISTLLTAC GRCRQTTKID TVLEEAKFRG
501: IELNIVAYNS GIGTYLSFGD YEKALEFYAT MMASNVNPNA VTYNILISGL CKLGKYAESL KFFEDMVDLR IPLTKEVYSS LICSYVKQDK LAEAESTFSY
601: MKTSGCFPDV LTYTAMIQAY IDHGSWTSVW DLFKEMEGNA ILPDAIICSS LMEALNKGNQ HERVLQLMKF MHDQSIELNQ KAYFEIIASC SMLRDWRTAS
701: EIIEHLDSSL PSISVGKLNH LLNFLGKCGK TESMMKLFYK MVSACSTVGL STYKVLLRNL LAVGKWRKYV EVLQWMEDAG VRPTLYMYQN VLPYIWRDNS
801: MDYVTLMQEK IKPGDEYVTE ESVEYANEDQ AFDNSENFVG KMTIPSKSLI SLLC

Best Arabidopsis Sequence Match ( AT2G41720.3 )
(BLAST)

001: MATVTNFKLV TPPESSRADK PGATKASDAF QEKKSVSVNY DRGEHEVSVN IGGLRKADIP RRYRIRVEND RFQKDWSVSE VVDRLMALNR WEEVDGVLNS
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LGEMREECKI NDSVT

Arabidopsis Description

EMB2654EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.