Factsheet for TraesCS7A01G407400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G095190.4	Barley	mitochondrion, plastid	95.4	85.49
TraesCS7D01G400900.3	Wheat	cytosol	96.06	84.59
TraesCS7B01G307500.2	Wheat	cytosol	95.84	84.39
Os06t0710800-01	Rice	cytosol	85.34	79.27
HORVU0Hr1G007320.4	Barley	cytosol	78.12	77.44
OQU77078	Sorghum	mitochondrion	82.49	76.32
Zm00001d014751_P003	Maize	plastid	78.77	67.67
GSMUA_Achr1P10690_001	Banana	cytosol	43.11	59.52
VIT_16s0039g02560.t01	Wine grape	cytosol	52.3	48.78
Solyc10g080330.1.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, nucleus	39.61	47.51
CDY64953	Canola	cytosol	29.98	47.08
AT5G36300.2	Thale cress	cytosol	32.17	44.55
KRH27783	Soybean	cytosol, plastid	49.45	43.3
KRH77730	Soybean	plastid	49.02	42.83
Bra035352.1-P	Field mustard	mitochondrion	43.33	41.08
CDX74617	Canola	mitochondrion	31.07	40.46
PGSC0003DMT400060882	Potato	mitochondrion	47.26	39.71
TraesCS2A01G194800.1	Wheat	endoplasmic reticulum, extracellular	18.6	18.28
TraesCS7A01G133100.1	Wheat	plastid	18.38	16.54
TraesCS5A01G528400.1	Wheat	plastid	18.38	15.67
TraesCS6A01G303300.1	Wheat	plastid	17.51	14.81
TraesCS4A01G178100.5	Wheat	plastid	16.41	13.86
TraesCS6A01G163600.2	Wheat	nucleus	18.82	13.63
TraesCS7A01G495500.1	Wheat	plastid	22.54	12.7
TraesCS3A01G523700.1	Wheat	plastid	16.85	12.66
TraesCS5A01G486300.1	Wheat	plastid	22.76	11.97
TraesCS5A01G085800.1	Wheat	plastid	22.32	11.89
TraesCS2A01G239500.2	Wheat	plastid	19.47	10.42
TraesCS5A01G486200.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G407400.1	EnsemblPlantsGene:TraesCS7A01G407400	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF483
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:592928816..592931327

Molecular Weight (calculated)

51735.3 Da

IEP (calculated)

9.095

GRAVY (calculated)

-0.161

Length

457 amino acids

Sequence
(BLAST)

001: MDACCLVRRH LHPPLQLPPL QRLTLGRRGF TIAVACCSTA PDHHRERPWE SYDRSIQPHA GSDLARSLQL LADMQAAGMR PSAAAYARLI RALARAGRAL
101: EAEALLLEMR HLGLRPDAAH YNALLEGLLA RAHLRLADRL LLQMADDGVA RDRRTYTLLL DAYARAGRLE DSWWVLGEMK RRGIRLGTAG YSTLVRLYRD
201: SGMWKKATDL IMEMQELGVE LDVKIYNGLI DTFGKYGQLA DARRVFEKMR GEGIKPDIAT WNALIRWHCR VGNMKRALRF LAAMQEEGMY PDPKIFITII
301: SRLGEQGKWD ELKELFDKMR NRGFKESGAI YAVLVDIYGQ YGHSRDAQEC VAALKAENLQ LSPSIFCVLA NAYAQQGLCE QTVSVLQLME EEGIEPNLVM
401: LNLLINAFST AGRHLEALAV FQHIKDSGMS PDVVTYTTLM KAFMRVKRYE KVRLLYL

Best Arabidopsis Sequence Match ( AT1G63130.1 )
(BLAST)

001: MRRLFAISST GNRFVHRSLL GKGKCGTAPP SFSHCSFWVR DFSGVRYDYR KISINRLNDL KLDDAVNLFG DMVKSRPFPS IVEFSKLLSA IAKMNKFDLV
101: ISLGEQMQNL GISHNLYTYS ILINCFCRRS QLSLALAVLA KMMKLGYEPD IVTLNSLLNG FCHGNRISDA VSLVGQMVEM GYQPDSFTFN TLIHGLFRHN
201: RASEAVALVD RMVVKGCQPD LVTYGIVVNG LCKRGDIDLA LSLLKKMEQG KIEPGVVIYN TIIDALCNYK NVNDALNLFT EMDNKGIRPN VVTYNSLIRC
301: LCNYGRWSDA SRLLSDMIER KINPNVVTFS ALIDAFVKEG KLVEAEKLYD EMIKRSIDPD IFTYSSLING FCMHDRLDEA KHMFELMISK DCFPNVVTYN
401: TLIKGFCKAK RVDEGMELFR EMSQRGLVGN TVTYTTLIHG FFQARECDNA QIVFKQMVSD GVLPDIMTYS ILLDGLCNNG KVETALVVFE YLQRSKMEPD
501: IYTYNIMIEG MCKAGKVEDG WDLFCSLSLK GVKPNVVTYT TMMSGFCRKG LKEEADALFR EMKEEGPLPD SGTYNTLIRA HLRDGDKAAS AELIREMRSC
601: RFVGDASTIG LVTNMLHDGR LDKSFLKMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g63130, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.