Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74617 | Canola | mitochondrion | 96.56 | 80.06 |
| AT5G36300.2 | Thale cress | cytosol | 71.48 | 63.03 |
| GSMUA_Achr1P10690_001 | Banana | cytosol | 53.61 | 47.13 |
| Solyc10g080330.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 51.55 | 39.37 |
| VIT_16s0039g02560.t01 | Wine grape | cytosol | 62.89 | 37.35 |
| KRH27783 | Soybean | cytosol, plastid | 60.14 | 33.52 |
| KRH77730 | Soybean | plastid | 59.79 | 33.27 |
| Os06t0710800-01 | Rice | cytosol | 54.3 | 32.11 |
| OQU77078 | Sorghum | mitochondrion | 53.26 | 31.38 |
| HORVU0Hr1G007320.4 | Barley | cytosol | 48.8 | 30.8 |
| PGSC0003DMT400060882 | Potato | mitochondrion | 56.7 | 30.33 |
| TraesCS7A01G407400.1 | Wheat | cytosol | 47.08 | 29.98 |
| TraesCS7D01G400900.3 | Wheat | cytosol | 52.92 | 29.67 |
| TraesCS7B01G307500.2 | Wheat | cytosol | 52.23 | 29.29 |
| HORVU7Hr1G095190.4 | Barley | mitochondrion, plastid | 51.2 | 29.22 |
| Zm00001d014751_P003 | Maize | plastid | 44.67 | 24.44 |
| CDY31603 | Canola | plastid | 40.55 | 17.8 |
| CDX71562 | Canola | mitochondrion, plastid | 41.24 | 17.17 |
| CDY41990 | Canola | plastid | 17.87 | 11.04 |
| CDX71198 | Canola | cytosol | 20.96 | 10.78 |
| CDY42639 | Canola | plastid | 17.87 | 10.77 |
| CDX98345 | Canola | cytosol | 11.34 | 10.61 |
| CDX85360 | Canola | plastid | 17.53 | 10.1 |
| CDX86283 | Canola | plastid | 17.53 | 10.04 |
| CDX78150 | Canola | plastid | 14.78 | 8.87 |
| CDY06027 | Canola | plastid | 16.15 | 8.85 |
| CDY31666 | Canola | cytosol | 18.56 | 8.67 |
| CDX71917 | Canola | plastid | 16.15 | 8.62 |
| CDX73576 | Canola | plastid | 14.78 | 8.62 |
| CDY05264 | Canola | plastid | 14.43 | 8.57 |
| CDX84260 | Canola | cytosol, nucleus, plastid | 18.9 | 8.55 |
| CDY24692 | Canola | plastid | 14.09 | 8.54 |
| CDY32056 | Canola | plastid | 21.99 | 7.91 |
| CDX79920 | Canola | cytosol, plastid | 20.27 | 7.22 |
| CDY23832 | Canola | plastid | 20.27 | 7.21 |
| CDY56509 | Canola | plastid | 19.93 | 7.09 |
| CDY45398 | Canola | plastid | 20.96 | 7.06 |
| CDY29249 | Canola | plastid | 19.59 | 6.98 |
| CDX73117 | Canola | plastid | 20.62 | 6.95 |
| CDY15384 | Canola | cytosol | 9.97 | 6.81 |
| CDY19091 | Canola | cytosol | 15.12 | 6.04 |
| CDY10802 | Canola | plastid | 15.81 | 5.42 |
| CDY56616 | Canola | plastid | 13.4 | 4.94 |
| CDY52317 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A078JBI3 | EnsemblPlants:CDY64953 | ProteinID:CDY64953 | ProteinID:CDY64953.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00043906001 | InterPro:IPR002885 | InterPro:IPR011990 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF483 |
| InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EEB309 | : | : |
Description
BnaCnng45620DBnaCnng45620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBI3]
Coordinates
chrLK034608:-:15337..17208
Molecular Weight (calculated)
32791.8 Da
IEP (calculated)
6.070
GRAVY (calculated)
-0.202
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLAELDSL GSQPDPRSYV TLIETLSALG RTLEADALFQ EVIRSGLHGS YPLRLYNALL GGYLRKGQLE LEESWRVVNE MKKREFPLTS FVYGKIIRIY
101: RDNGMWKKAL GIVEEISEIG LPMDVEIYNS IIDTFGKYGE LDEALQFGSF QDPEELVGRL KSEGVAPSAN MFCTLADAYA QQGLCKQTVK VLKMMEKEGT
201: EPNLIMLNVL INAFGNAGKH MEALSIYHHI KESGFTPDVV TYSTLMKAFT RAKKYEKVPE IFREMEASGC SADRKARQLL QNALMVLDKR H
101: RDNGMWKKAL GIVEEISEIG LPMDVEIYNS IIDTFGKYGE LDEALQFGSF QDPEELVGRL KSEGVAPSAN MFCTLADAYA QQGLCKQTVK VLKMMEKEGT
201: EPNLIMLNVL INAFGNAGKH MEALSIYHHI KESGFTPDVV TYSTLMKAFT RAKKYEKVPE IFREMEASGC SADRKARQLL QNALMVLDKR H
001: MSLLAEIHSL GSRPDPLSYV SFIETLASLR RTLEADALFH EVVRFMIYGS YSVRLYNALV SRYLRKEVSW RVVNEMKKRK FRLNSFVYGK IIRIYRDNGM
101: WKKALGIVEE IREIGLPMDV EIYNSVIDTF GKYGELDEEL QFGSFEDIGE LVGKLKSQGV APSANLFCTL ANAYAQQGLC KQTVKVLKMM ENEGIEPNLI
201: MLNVLINAFG TAGKHMEALS IYHHIKETVW IHPDVVTYST LMKAFTRAKK YEMVCSRNIQ GNGSFWVYNR SESKTIIAKC YYGS
101: WKKALGIVEE IREIGLPMDV EIYNSVIDTF GKYGELDEEL QFGSFEDIGE LVGKLKSQGV APSANLFCTL ANAYAQQGLC KQTVKVLKMM ENEGIEPNLI
201: MLNVLINAFG TAGKHMEALS IYHHIKETVW IHPDVVTYST LMKAFTRAKK YEMVCSRNIQ GNGSFWVYNR SESKTIIAKC YYGS
Arabidopsis Description
Putative pentatricopeptide repeat-containing protein At5g36300 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFZ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.