Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31666 | Canola | cytosol | 17.65 | 0.48 |
| CDX84260 | Canola | cytosol, nucleus, plastid | 17.65 | 0.47 |
| CDY31603 | Canola | plastid | 11.76 | 0.3 |
| CDX71562 | Canola | mitochondrion, plastid | 11.76 | 0.29 |
| CDX73117 | Canola | plastid | 11.76 | 0.23 |
| CDX78150 | Canola | plastid | 5.88 | 0.21 |
| CDX73576 | Canola | plastid | 5.88 | 0.2 |
| CDY06027 | Canola | plastid | 5.88 | 0.19 |
| CDX71198 | Canola | cytosol | 5.88 | 0.18 |
| CDY32056 | Canola | plastid | 5.88 | 0.12 |
| CDY29249 | Canola | plastid | 5.88 | 0.12 |
| CDY56509 | Canola | plastid | 5.88 | 0.12 |
| CDY45398 | Canola | plastid | 5.88 | 0.12 |
| CDY41990 | Canola | plastid | 0.0 | 0.0 |
| CDY42639 | Canola | plastid | 0.0 | 0.0 |
| CDY64953 | Canola | cytosol | 0.0 | 0.0 |
| CDY56616 | Canola | plastid | 0.0 | 0.0 |
| CDY24692 | Canola | plastid | 0.0 | 0.0 |
| CDY23832 | Canola | plastid | 0.0 | 0.0 |
| CDY19091 | Canola | cytosol | 0.0 | 0.0 |
| CDY15384 | Canola | cytosol | 0.0 | 0.0 |
| CDY10802 | Canola | plastid | 0.0 | 0.0 |
| CDY05264 | Canola | plastid | 0.0 | 0.0 |
| CDX98345 | Canola | cytosol | 0.0 | 0.0 |
| CDX86283 | Canola | plastid | 0.0 | 0.0 |
| CDX85360 | Canola | plastid | 0.0 | 0.0 |
| CDX79920 | Canola | cytosol, plastid | 0.0 | 0.0 |
| CDX74617 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX71917 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY52317 | EnsemblPlantsGene:GSBRNA2T00006744001 | ProteinID:CDY52317 | ProteinID:CDY52317.1 | UniParc:UPI0004EE72D3 | UniProt:A0A078IQU6 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g36160DBnaA01g36160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQU6]
Coordinates
chrLK033078:+:29957..30010
Molecular Weight (calculated)
2062.3 Da
IEP (calculated)
4.353
GRAVY (calculated)
-1.753
Length
17 amino acids
Sequence
(BLAST)
(BLAST)
1: MDSDKYSKFC EEEDAKH
001: MACRLFWASR VASHLRISVA QRGFSSVVLK DLKYADSHEW VKIDGNKATF GITDHAQDHL GDVVYVELPD VGHSVSQGKS FGAVESVKAT SDINSPVSGK
101: VVEVNEELTE SPGLVNSSPY EQGWIIKVEL SDAGEAEKLM DSDKYSKFCE EEDAKH
101: VVEVNEELTE SPGLVNSSPY EQGWIIKVEL SDAGEAEKLM DSDKYSKFCE EEDAKH
Arabidopsis Description
GDH2Glycine cleavage system H protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O82179]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.