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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G407400.1 Wheat cytosol 84.59 96.06
TraesCS7B01G307500.2 Wheat cytosol 95.76 95.76
HORVU7Hr1G095190.4 Barley mitochondrion, plastid 94.03 95.69
Os06t0710800-01 Rice cytosol 79.96 84.35
HORVU0Hr1G007320.4 Barley cytosol 74.57 83.95
OQU77078 Sorghum mitochondrion 77.26 81.17
Zm00001d014751_P003 Maize plastid 70.13 68.42
GSMUA_Achr1P10690_001 Banana cytosol 42.58 66.77
VIT_16s0039g02560.t01 Wine grape cytosol 50.87 53.88
Solyc10g080330.1.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, nucleus 39.31 53.54
CDY64953 Canola cytosol 29.67 52.92
KRH27783 Soybean cytosol, plastid 47.59 47.32
KRH77730 Soybean plastid 47.21 46.85
CDX74617 Canola mitochondrion 31.6 46.72
Bra035352.1-P Field mustard mitochondrion 42.58 45.85
AT5G36300.2 Thale cress cytosol 28.71 45.15
PGSC0003DMT400060882 Potato mitochondrion 43.35 41.36
TraesCS4D01G353200.2 Wheat cytosol 15.22 16.29
TraesCS6D01G282900.1 Wheat plastid 15.8 15.19
TraesCS2D01G193100.1 Wheat plastid 22.35 14.63
TraesCS4D01G132900.3 Wheat plastid 14.84 14.23
TraesCS6D01G147800.2 Wheat cytosol, mitochondrion 16.18 14.17
TraesCS7D01G482800.1 Wheat plastid 20.81 13.27
TraesCS3D01G529200.1 Wheat plastid 15.41 13.09
TraesCS5D01G500300.1 Wheat plastid 20.42 12.18
TraesCS5D01G097800.1 Wheat plastid 19.65 11.92
TraesCS2D01G244500.3 Wheat plastid 18.69 11.58
Protein Annotations
EnsemblPlants:TraesCS7D01G400900.3EnsemblPlantsGene:TraesCS7D01G400900Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF483
PFAM:PF01535PFAM:PF13041PFAM:PF13812PFscan:PS51375SEG:segTIGRFAMs:TIGR00756
MapMan:35.1:::::
Description
No Description!
Coordinates
chr7D:-:518057402..518060197
Molecular Weight (calculated)
58920.0 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.169
Length
519 amino acids
Sequence
(BLAST)
001: MSMDACCLVR RHLHPPPQLP PLQRLTIGRR CRRRGVTIAV ACCSTAPDHH RERPWESYDR DIQPHAGSDL ARSLQLLADM QATGMRPSAA AYARLIRALA
101: RAGRTLEAEA LLLEMRHLGL RPDAAHYNAL LEGLLARAHL RLADRLLLQM ADDGVARNRR TYMLLLDAYA RAGRLEDSWW VLGEMKRRGV RLGTAGYSTL
201: VRLYRDSGMW KKATDLILEM QELGVELDVK IYNGLIDTFG KYGQLADARG VFEKMRGQGI KPDIATWNAL IRWHCRVGNM KRALRFLAAM QEEGMYPDPK
301: IFITIISRLG EQGKWDELKE LFDKMRNRGF KESGAIYAVL VDIYGQYGHF RDAQECVAAL KAENLQLSPS IFCVLANAYA QQGLCEQTVS VLQLMEAEGI
401: EPNLVMLNLL INAFSTAGRH VEALAVFQHI KDSGMSPDVV TYTTLMKAFM RVKRYEKVSE IYSEMERAGC TPDRKAREML HDASVTMDQM GCKCFICTFA
501: AVFLWFSRMY WLTHALPDY
Best Arabidopsis Sequence Match ( AT5G42310.1 )
(BLAST)
001: MLLLQQPPLV STRFHSLYFL THHHHHHHRF FQPPISAFSA TTSASLPSPS PSSSSSYFSS WNGLDTNEEE DNEFSSEVHR RYDFSPLLKF LSRFGPVELA
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS
Arabidopsis Description
CRP1Pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L844]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.