Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G407400.1 | Wheat | cytosol | 84.59 | 96.06 |
TraesCS7B01G307500.2 | Wheat | cytosol | 95.76 | 95.76 |
HORVU7Hr1G095190.4 | Barley | mitochondrion, plastid | 94.03 | 95.69 |
Os06t0710800-01 | Rice | cytosol | 79.96 | 84.35 |
HORVU0Hr1G007320.4 | Barley | cytosol | 74.57 | 83.95 |
OQU77078 | Sorghum | mitochondrion | 77.26 | 81.17 |
Zm00001d014751_P003 | Maize | plastid | 70.13 | 68.42 |
GSMUA_Achr1P10690_001 | Banana | cytosol | 42.58 | 66.77 |
VIT_16s0039g02560.t01 | Wine grape | cytosol | 50.87 | 53.88 |
Solyc10g080330.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 39.31 | 53.54 |
CDY64953 | Canola | cytosol | 29.67 | 52.92 |
KRH27783 | Soybean | cytosol, plastid | 47.59 | 47.32 |
KRH77730 | Soybean | plastid | 47.21 | 46.85 |
CDX74617 | Canola | mitochondrion | 31.6 | 46.72 |
Bra035352.1-P | Field mustard | mitochondrion | 42.58 | 45.85 |
AT5G36300.2 | Thale cress | cytosol | 28.71 | 45.15 |
PGSC0003DMT400060882 | Potato | mitochondrion | 43.35 | 41.36 |
TraesCS4D01G353200.2 | Wheat | cytosol | 15.22 | 16.29 |
TraesCS6D01G282900.1 | Wheat | plastid | 15.8 | 15.19 |
TraesCS2D01G193100.1 | Wheat | plastid | 22.35 | 14.63 |
TraesCS4D01G132900.3 | Wheat | plastid | 14.84 | 14.23 |
TraesCS6D01G147800.2 | Wheat | cytosol, mitochondrion | 16.18 | 14.17 |
TraesCS7D01G482800.1 | Wheat | plastid | 20.81 | 13.27 |
TraesCS3D01G529200.1 | Wheat | plastid | 15.41 | 13.09 |
TraesCS5D01G500300.1 | Wheat | plastid | 20.42 | 12.18 |
TraesCS5D01G097800.1 | Wheat | plastid | 19.65 | 11.92 |
TraesCS2D01G244500.3 | Wheat | plastid | 18.69 | 11.58 |
Protein Annotations
EnsemblPlants:TraesCS7D01G400900.3 | EnsemblPlantsGene:TraesCS7D01G400900 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF483 |
PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 |
MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:518057402..518060197
Molecular Weight (calculated)
58920.0 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.169
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMDACCLVR RHLHPPPQLP PLQRLTIGRR CRRRGVTIAV ACCSTAPDHH RERPWESYDR DIQPHAGSDL ARSLQLLADM QATGMRPSAA AYARLIRALA
101: RAGRTLEAEA LLLEMRHLGL RPDAAHYNAL LEGLLARAHL RLADRLLLQM ADDGVARNRR TYMLLLDAYA RAGRLEDSWW VLGEMKRRGV RLGTAGYSTL
201: VRLYRDSGMW KKATDLILEM QELGVELDVK IYNGLIDTFG KYGQLADARG VFEKMRGQGI KPDIATWNAL IRWHCRVGNM KRALRFLAAM QEEGMYPDPK
301: IFITIISRLG EQGKWDELKE LFDKMRNRGF KESGAIYAVL VDIYGQYGHF RDAQECVAAL KAENLQLSPS IFCVLANAYA QQGLCEQTVS VLQLMEAEGI
401: EPNLVMLNLL INAFSTAGRH VEALAVFQHI KDSGMSPDVV TYTTLMKAFM RVKRYEKVSE IYSEMERAGC TPDRKAREML HDASVTMDQM GCKCFICTFA
501: AVFLWFSRMY WLTHALPDY
101: RAGRTLEAEA LLLEMRHLGL RPDAAHYNAL LEGLLARAHL RLADRLLLQM ADDGVARNRR TYMLLLDAYA RAGRLEDSWW VLGEMKRRGV RLGTAGYSTL
201: VRLYRDSGMW KKATDLILEM QELGVELDVK IYNGLIDTFG KYGQLADARG VFEKMRGQGI KPDIATWNAL IRWHCRVGNM KRALRFLAAM QEEGMYPDPK
301: IFITIISRLG EQGKWDELKE LFDKMRNRGF KESGAIYAVL VDIYGQYGHF RDAQECVAAL KAENLQLSPS IFCVLANAYA QQGLCEQTVS VLQLMEAEGI
401: EPNLVMLNLL INAFSTAGRH VEALAVFQHI KDSGMSPDVV TYTTLMKAFM RVKRYEKVSE IYSEMERAGC TPDRKAREML HDASVTMDQM GCKCFICTFA
501: AVFLWFSRMY WLTHALPDY
001: MLLLQQPPLV STRFHSLYFL THHHHHHHRF FQPPISAFSA TTSASLPSPS PSSSSSYFSS WNGLDTNEEE DNEFSSEVHR RYDFSPLLKF LSRFGPVELA
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS
101: LDSESESEAS PESLNPVEFD LVESYRAVPA PYWHSLIKSL TSSTSSLGLA YAVVSWLQKH NLCFSYELLY SILIHALGRS EKLYEAFLLS QKQTLTPLTY
201: NALIGACARN NDIEKALNLI AKMRQDGYQS DFVNYSLVIQ SLTRSNKIDS VMLLRLYKEI ERDKLELDVQ LVNDIIMGFA KSGDPSKALQ LLGMAQATGL
301: SAKTATLVSI ISALADSGRT LEAEALFEEL RQSGIKPRTR AYNALLKGYV KTGPLKDAES MVSEMEKRGV SPDEHTYSLL IDAYVNAGRW ESARIVLKEM
401: EAGDVQPNSF VFSRLLAGFR DRGEWQKTFQ VLKEMKSIGV KPDRQFYNVV IDTFGKFNCL DHAMTTFDRM LSEGIEPDRV TWNTLIDCHC KHGRHIVAEE
501: MFEAMERRGC LPCATTYNIM INSYGDQERW DDMKRLLGKM KSQGILPNVV THTTLVDVYG KSGRFNDAIE CLEEMKSVGL KPSSTMYNAL INAYAQRGLS
601: EQAVNAFRVM TSDGLKPSLL ALNSLINAFG EDRRDAEAFA VLQYMKENGV KPDVVTYTTL MKALIRVDKF QKVPVVYEEM IMSGCKPDRK ARSMLRSALR
701: YMKQTLRAS
Arabidopsis Description
CRP1Pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L844]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.