Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G486300.1 | Wheat | plastid | 98.28 | 98.39 |
| TraesCS5B01G500100.1 | Wheat | plastid | 98.39 | 97.38 |
| HORVU5Hr1G114630.1 | Barley | mitochondrion | 93.1 | 97.24 |
| Os03t0824100-01 | Rice | plastid | 84.37 | 84.56 |
| OQU90703 | Sorghum | plastid | 83.56 | 81.05 |
| Zm00001d022599_P002 | Maize | plastid | 83.1 | 80.87 |
| GSMUA_Achr1P18290_001 | Banana | cytosol | 45.98 | 60.24 |
| CDX73117 | Canola | plastid | 49.89 | 50.29 |
| Bra015889.1-P | Field mustard | plastid | 49.66 | 50.0 |
| CDY45398 | Canola | plastid | 49.54 | 49.88 |
| AT1G74850.1 | Thale cress | plastid | 49.2 | 49.65 |
| KRH56998 | Soybean | nucleus | 48.85 | 49.53 |
| VIT_17s0000g07500.t01 | Wine grape | plastid | 49.43 | 49.48 |
| KRH03384 | Soybean | nucleus | 48.85 | 49.48 |
| PGSC0003DMT400063174 | Potato | plastid | 48.39 | 48.95 |
| Solyc03g113630.2.1 | Tomato | nucleus | 48.05 | 48.6 |
| TraesCS7D01G400900.3 | Wheat | cytosol | 12.18 | 20.42 |
| TraesCS7D01G482800.1 | Wheat | plastid | 19.08 | 20.39 |
| TraesCS5D01G097800.1 | Wheat | plastid | 19.66 | 19.98 |
| TraesCS2D01G193100.1 | Wheat | plastid | 18.05 | 19.8 |
| TraesCS4D01G132900.3 | Wheat | plastid | 11.49 | 18.48 |
| TraesCS6D01G282900.1 | Wheat | plastid | 11.26 | 18.15 |
| TraesCS2D01G244500.3 | Wheat | plastid | 17.13 | 17.78 |
| TraesCS4D01G353200.2 | Wheat | cytosol | 9.54 | 17.11 |
| TraesCS3D01G529200.1 | Wheat | plastid | 10.8 | 15.38 |
| TraesCS6D01G147800.2 | Wheat | cytosol, mitochondrion | 10.46 | 15.35 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:15.6.1.2.2.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009295 | GO:GO:0009507 | GO:GO:0009508 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0042793 | GO:GO:0045893 | InterPro:IPR002625 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 |
| PFAM:PF13041 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF726 | InterPro:Pentatricopeptide_repeat | SMART:SM00463 | InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| EnsemblPlantsGene:TraesCS5D01G500300 | EnsemblPlants:TraesCS5D01G500300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:528973709..528977898
Molecular Weight (calculated)
96209.6 Da
IEP (calculated)
5.975
GRAVY (calculated)
-0.199
Length
870 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVSTTTVA SSSSYHCDHP LRPAAARSWC RPRSRGGGRL AVLARARGQL TTTPKEEAAP AASAAGERGR YSYEVDSLID RLSNLAPRGS IARCLETAKH
101: RLTLQDFAAV YREFSRRGDW QRSVRLFKYM QRQSWCRPDE HIHAIVIGVL GRQGPALLDK CLEVFQDLPA DARTALSYTS LIAAYARNAL HDDARALLDQ
201: MKAQGVAPTA ATYNTVLAAC ARAADPPVPF DMLLGLFAEM RHDPSPAVRP DLTTYNTLLL AAAVRSLSDQ SEMLLRTMLE AGIMPDTASY RYIVDAFANA
301: GDLSRVAELF REMADTGHTP DPSAYLGLME AHTRIGATAE AVAVLRQMQA DGCAPTAATY RVLLDQYGKQ GRFDGVRELF REMRTAVPPD TATYNVLFNV
401: FGDGGFFKEV VELFHDMLRT GIEPDMETCE GVLAACGQGG LHEDAREVLD YITKEGMVPT AKAYTGLIEA LGHAAMYEEA YVAFNMMTEI GSLPTIETYN
501: SLANVFAKGG LFREAESVFS RMTNSAGIQK SKDSYDALIE AYCQGSQLDD AVKAYMEMRK SRFNPDERSL EGVLNAYCIA GVIDESKEQF EEIRSNMTVP
601: SIIAYCMMLS LYARNDRWAD AYDLLEEMKA NRASNTHQVI ASMIKGEYDD SSNWQMVEYV LDSSNLEGCD YSLRFFNSLL DALWWFGQKA RAARVLDHAV
701: SYGLFPELSR DTKLVWSLDV HRMSVGGALV AVSVWLNKLY ARLKREKDLP QLASVVVLRG EMEKSTITRG LPISKVVYSF LNDTLSASFH YPKWNKGRVI
801: CLKSQLKKLQ AAIDSTNGAA VPGFVHMTDS RLPSPGSKVY AREPQVENGS AHSTSESLVE EEKESELLAL
101: RLTLQDFAAV YREFSRRGDW QRSVRLFKYM QRQSWCRPDE HIHAIVIGVL GRQGPALLDK CLEVFQDLPA DARTALSYTS LIAAYARNAL HDDARALLDQ
201: MKAQGVAPTA ATYNTVLAAC ARAADPPVPF DMLLGLFAEM RHDPSPAVRP DLTTYNTLLL AAAVRSLSDQ SEMLLRTMLE AGIMPDTASY RYIVDAFANA
301: GDLSRVAELF REMADTGHTP DPSAYLGLME AHTRIGATAE AVAVLRQMQA DGCAPTAATY RVLLDQYGKQ GRFDGVRELF REMRTAVPPD TATYNVLFNV
401: FGDGGFFKEV VELFHDMLRT GIEPDMETCE GVLAACGQGG LHEDAREVLD YITKEGMVPT AKAYTGLIEA LGHAAMYEEA YVAFNMMTEI GSLPTIETYN
501: SLANVFAKGG LFREAESVFS RMTNSAGIQK SKDSYDALIE AYCQGSQLDD AVKAYMEMRK SRFNPDERSL EGVLNAYCIA GVIDESKEQF EEIRSNMTVP
601: SIIAYCMMLS LYARNDRWAD AYDLLEEMKA NRASNTHQVI ASMIKGEYDD SSNWQMVEYV LDSSNLEGCD YSLRFFNSLL DALWWFGQKA RAARVLDHAV
701: SYGLFPELSR DTKLVWSLDV HRMSVGGALV AVSVWLNKLY ARLKREKDLP QLASVVVLRG EMEKSTITRG LPISKVVYSF LNDTLSASFH YPKWNKGRVI
801: CLKSQLKKLQ AAIDSTNGAA VPGFVHMTDS RLPSPGSKVY AREPQVENGS AHSTSESLVE EEKESELLAL
001: MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
Arabidopsis Description
PTAC2PTAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.