Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90703 | Sorghum | plastid | 93.62 | 93.31 |
| Os03t0824100-01 | Rice | plastid | 84.0 | 86.52 |
| HORVU5Hr1G114630.1 | Barley | mitochondrion | 78.41 | 84.15 |
| TraesCS5A01G486300.1 | Wheat | plastid | 81.1 | 83.43 |
| TraesCS5D01G500300.1 | Wheat | plastid | 80.87 | 83.1 |
| TraesCS5B01G500100.1 | Wheat | plastid | 81.32 | 82.71 |
| GSMUA_Achr1P18290_001 | Banana | cytosol | 45.08 | 60.69 |
| CDX73117 | Canola | plastid | 48.55 | 50.29 |
| CDY45398 | Canola | plastid | 48.32 | 50.0 |
| Bra015889.1-P | Field mustard | plastid | 48.21 | 49.88 |
| AT1G74850.1 | Thale cress | plastid | 47.99 | 49.77 |
| KRH56998 | Soybean | nucleus | 47.2 | 49.18 |
| VIT_17s0000g07500.t01 | Wine grape | plastid | 47.65 | 49.02 |
| KRH03384 | Soybean | nucleus | 46.98 | 48.89 |
| PGSC0003DMT400063174 | Potato | plastid | 46.87 | 48.72 |
| Solyc03g113630.2.1 | Tomato | nucleus | 46.42 | 48.26 |
| Zm00001d036698_P001 | Maize | plastid | 18.68 | 21.25 |
| Zm00001d037476_P001 | Maize | plastid | 11.52 | 20.93 |
| Zm00001d030624_P001 | Maize | plastid | 19.69 | 20.23 |
| Zm00001d022003_P001 | Maize | plastid | 17.79 | 20.0 |
| Zm00001d021716_P001 | Maize | plastid | 14.77 | 19.76 |
| Zm00001d014751_P003 | Maize | plastid | 11.52 | 19.36 |
| Zm00001d052240_P001 | Maize | plastid | 10.74 | 19.24 |
| Zm00001d015377_P003 | Maize | plastid | 12.64 | 18.93 |
| Zm00001d027349_P001 | Maize | plastid | 9.96 | 18.35 |
| Zm00001d021871_P002 | Maize | plastid | 15.77 | 17.52 |
| Zm00001d018693_P001 | Maize | plastid | 9.84 | 15.41 |
| Zm00001d024248_P001 | Maize | plastid | 10.07 | 15.0 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103633614 | MapMan:15.6.1.2.2.2 | UniProt:A0A1D6IPQ0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009295 | GO:GO:0009507 | GO:GO:0009508 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0042793 | GO:GO:0045893 | InterPro:IPR002625 | InterPro:IPR002885 |
| InterPro:IPR011990 | ProteinID:ONM61207.1 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 | InterPro:PPR_long |
| PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF726 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 |
| InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0008DB348D | EnsemblPlantsGene:Zm00001d022599 | EnsemblPlants:Zm00001d022599_P002 |
| EnsemblPlants:Zm00001d022599_T002 | SEG:seg | : | : | : | : |
Description
plastid transcriptionally active chromosome 2 homolog plastid transcriptionally active chromosome 2 homolog
Coordinates
chr7:+:180824817..180834362
Molecular Weight (calculated)
98330.1 Da
IEP (calculated)
5.824
GRAVY (calculated)
-0.134
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVSTATVA SSSYHCDPHL FPGARRSWRE PRWSRGGAGA RLAVLQRAGG GGLAVLERAG AGAGSAVLER AGGAAAAAAR REELVPSGNA RNSYEVESLI
101: DRLSNLPPRG SIARCLETAR HRLTLQDFAA VYREFSRRGD WQRSLRLFKY MQRQSWCRPD EHIHAIVIGV LGRQGPALLD KCLEVFHDLP AESRTALSYT
201: SLIAAYARNA LHEEARALLD QMKATGVAPT AATYNTVLAA CARATDPPVP FDMLLGLFAE MRHDASPSVR PDLTTYNTLL AAAAVRSLAD QSEMLLHTML
301: EAGVSPDTVS YRHIVDAFAS AGNLSRAAEL FSEMAATGHT ADASAYLGLM EAHTRVGATA DAVAVLRQMQ ADGCAPTAAT YRVLLDLYGR QGRFDGVRQL
401: FREMRTAVPP DTATYNVLFR VFGDGGFFKE VVELFHDMLK TGVQPDMVTC ENVMAACGHG GLHGDAREVL EYMTREGMVP TADAYTGLVE ALGHAAMYEE
501: AYVAFNMMTE IGSLPTLETY NALAFAYARG GLFQEAEAIF SRMSNNAGIQ KSKDSFDALI EAYCQGSRLD DAVKAYMEMR KSRFNPDERS LEGVLNAYCI
601: AGVIDESKEQ FEELQSSVTM PSVIAYCMML SLYARNDRWT DAYDLLEEMK TNRASSTHQV IASLIKGEYD DSSNWQMVEY VLENSTMEGC DYSFRFFNAL
701: LGVLWWFGQK GRAARVLDQA VKFGLFPELY RDTKLVWSLD VHSLHFRMSM GGALVAVSVW LNKLYDRLVE DEDLPQLASV VVLRGEMEKS TVTRGLPIAK
801: VVYSFLNDTL SASFHFPKWN KGRIICLKSQ LKRLQSAVDS SNGSLAAGFV DMTNSRLPAP GSKIYTSEDQ LDNGSRHLPD EPLAEEKESE LLAL
101: DRLSNLPPRG SIARCLETAR HRLTLQDFAA VYREFSRRGD WQRSLRLFKY MQRQSWCRPD EHIHAIVIGV LGRQGPALLD KCLEVFHDLP AESRTALSYT
201: SLIAAYARNA LHEEARALLD QMKATGVAPT AATYNTVLAA CARATDPPVP FDMLLGLFAE MRHDASPSVR PDLTTYNTLL AAAAVRSLAD QSEMLLHTML
301: EAGVSPDTVS YRHIVDAFAS AGNLSRAAEL FSEMAATGHT ADASAYLGLM EAHTRVGATA DAVAVLRQMQ ADGCAPTAAT YRVLLDLYGR QGRFDGVRQL
401: FREMRTAVPP DTATYNVLFR VFGDGGFFKE VVELFHDMLK TGVQPDMVTC ENVMAACGHG GLHGDAREVL EYMTREGMVP TADAYTGLVE ALGHAAMYEE
501: AYVAFNMMTE IGSLPTLETY NALAFAYARG GLFQEAEAIF SRMSNNAGIQ KSKDSFDALI EAYCQGSRLD DAVKAYMEMR KSRFNPDERS LEGVLNAYCI
601: AGVIDESKEQ FEELQSSVTM PSVIAYCMML SLYARNDRWT DAYDLLEEMK TNRASSTHQV IASLIKGEYD DSSNWQMVEY VLENSTMEGC DYSFRFFNAL
701: LGVLWWFGQK GRAARVLDQA VKFGLFPELY RDTKLVWSLD VHSLHFRMSM GGALVAVSVW LNKLYDRLVE DEDLPQLASV VVLRGEMEKS TVTRGLPIAK
801: VVYSFLNDTL SASFHFPKWN KGRIICLKSQ LKRLQSAVDS SNGSLAAGFV DMTNSRLPAP GSKIYTSEDQ LDNGSRHLPD EPLAEEKESE LLAL
001: MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
101: NKLSLNDFAL VFKEFAGRGD WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT ALINAYGRNG RYETSLELLD
201: RMKNEKISPS ILTYNTVINA CARGGLDWEG LLGLFAEMRH EGIQPDIVTY NTLLSACAIR GLGDEAEMVF RTMNDGGIVP DLTTYSHLVE TFGKLRRLEK
301: VCDLLGEMAS GGSLPDITSY NVLLEAYAKS GSIKEAMGVF HQMQAAGCTP NANTYSVLLN LFGQSGRYDD VRQLFLEMKS SNTDPDAATY NILIEVFGEG
401: GYFKEVVTLF HDMVEENIEP DMETYEGIIF ACGKGGLHED ARKILQYMTA NDIVPSSKAY TGVIEAFGQA ALYEEALVAF NTMHEVGSNP SIETFHSLLY
501: SFARGGLVKE SEAILSRLVD SGIPRNRDTF NAQIEAYKQG GKFEEAVKTY VDMEKSRCDP DERTLEAVLS VYSFARLVDE CREQFEEMKA SDILPSIMCY
601: CMMLAVYGKT ERWDDVNELL EEMLSNRVSN IHQVIGQMIK GDYDDDSNWQ IVEYVLDKLN SEGCGLGIRF YNALLDALWW LGQKERAARV LNEATKRGLF
701: PELFRKNKLV WSVDVHRMSE GGMYTALSVW LNDINDMLLK GDLPQLAVVV SVRGQLEKSS AARESPIAKA AFSFLQDHVS SSFSFTGWNG GRIMCQRSQL
801: KQLLSTKEPT SEESENKNLV ALANSPIFAA GTRASTSSDT NHSGNPTQRR TRTKKELAGS TA
Arabidopsis Description
PTAC2PTAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.