Factsheet for Zm00001d030624_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16159	Sorghum	plastid	94.71	94.5
Os12t0562300-01	Rice	cytosol	31.26	88.89
TraesCS5A01G085800.1	Wheat	plastid	82.99	84.15
TraesCS5D01G097800.1	Wheat	plastid	82.64	84.0
TraesCS5B01G091600.1	Wheat	plastid	82.64	83.8
HORVU5Hr1G022350.1	Barley	plastid	47.82	80.93
GSMUA_Achr2P02090_001	Banana	cytosol	55.52	74.31
CDY15384	Canola	cytosol	26.55	54.23
Bra018247.1-P	Field mustard	nucleus	17.82	51.16
PGSC0003DMT400018827	Potato	cytosol	44.14	50.79
CDY19091	Canola	cytosol	41.61	49.66
VIT_07s0005g01660.t01	Wine grape	plastid	48.16	48.33
Solyc06g009520.2.1	Tomato	nucleus, plastid	45.75	47.32
CDY10802	Canola	plastid	44.48	45.58
CDY56616	Canola	plastid	41.26	45.5
Bra019526.1-P	Field mustard	cytosol	13.56	44.7
AT2G31400.1	Thale cress	plastid	46.32	43.9
KRH45156	Soybean	plastid	40.8	40.43
Bra018246.1-P	Field mustard	plastid	22.87	40.28
KRH01436	Soybean	plastid	40.34	40.11
Bra021733.1-P	Field mustard	cytosol	43.22	34.24
Zm00001d022003_P001	Maize	plastid	18.74	20.5
Zm00001d037476_P001	Maize	plastid	11.15	19.72
Zm00001d022599_P002	Maize	plastid	20.23	19.69
Zm00001d027349_P001	Maize	plastid	10.92	19.59
Zm00001d036698_P001	Maize	plastid	16.78	18.58
Zm00001d018693_P001	Maize	plastid	11.95	18.21
Zm00001d052240_P001	Maize	plastid	10.23	17.84
Zm00001d021716_P001	Maize	plastid	13.68	17.81
Zm00001d015377_P003	Maize	plastid	11.84	17.25
Zm00001d014751_P003	Maize	plastid	10.23	16.73
Zm00001d021871_P002	Maize	plastid	15.17	16.4
Zm00001d024248_P001	Maize	plastid	10.92	15.83

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:103639469	MapMan:35.1	UniProt:A0A1D6KD91	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0010019	GO:GO:0031930	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990
ProteinID:ONM01205.1	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFAM:PF17177	InterPro:PPR_long
PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF366	InterPro:Pentatricopeptide_repeat	SMART:SM00463
SUPFAM:SSF160443	SUPFAM:SSF48452	InterPro:Smr_dom	InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000221D2AC	EnsemblPlantsGene:Zm00001d030624	EnsemblPlants:Zm00001d030624_P001	EnsemblPlants:Zm00001d030624_T001	SEG:seg	:

Description

genomes uncoupled1

Coordinates

chr1:+:149517794..149522592

Molecular Weight (calculated)

93894.1 Da

IEP (calculated)

8.915

GRAVY (calculated)

0.001

Length

870 amino acids

Sequence
(BLAST)

001: MATHFTPSQA HAASHHAAHH HSAAAAAAVT ATATARLHPS APPASASAAA AALCPPHLLA AASPAASSSA ACQPAHRPIF VGHGAPWAQQ PQRTAAAAAA
101: LGPEFRRART TKTISKRTRG GGGGGGAQDR GRVSSAAAGR CVEKLLRVAP EDRRGLGSAL SSFRGELLGP EDYCQILRGL GDRDKSALRA FEVFYAALPL
201: VGGGAVDKGK LLTAAIGALG KMGRPDLARR AFDTGIAGSY GNTVFAHSAL ISAYARSGLA TEAMGVLESM KGAGLRPTTV SYNAVIDACG KGGVDLRFTL
301: GYFRQMLQDG LCPDRKTFNS LLAACSRAGH LEDARTVFDE MIHLGSGRDI YTYNTFVDAI CKCGNMGLAL QVVLDMEANN AKPNVVTYST LMDGFSKLEK
401: YDEALKLREK MKSLRIQLDR VCYNTLLAIY VKTGKYDEIA TVCEEMEKLG IEKDTVTYNS LINGYGKQGR LDMVAFLVQD MRAQGVAPSV LTYSTLIDIY
501: SKAGMHGDAF NVYLDFKESG LKADVVLFSS FIDTLAKNGL VECALSLLDE MMKMGIKPNV VTYNTIIDAF GKSKIFTEED SDIGDMGIVG VYGGQVVRVT
601: NPVIRGGRSA TDVRMRRSQE LFFILELFQK MVQQGVRPNV VTFSAILNAC SRCNSFEDAA LLLEQLRLFD NSVYGVAYGL LMGHREAWSQ ARSLFNQLGR
701: MDSPTSSAFY NALTDVLWHF GQRQGAQQVV LEGVNRRVWE NTWGDFCLDL HLMSCGAAQA MVHAWLLNVR SIVFEGRAMP EFLSILTGWG KHSKVAGSST
801: LRRVIEALLL SIGAPFQAER FNIGRFVSPS ALVSAWLRES GTINILLLRN ERTQHANASN LVPRLQALQL

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.