CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030624_P001	Maize	plastid	94.5	94.71
Os12t0562300-01	Rice	cytosol	31.19	88.89
TraesCS5D01G097800.1	Wheat	plastid	83.6	85.16
TraesCS5A01G085800.1	Wheat	plastid	83.72	85.08
TraesCS5B01G091600.1	Wheat	plastid	83.37	84.73
HORVU5Hr1G022350.1	Barley	plastid	47.71	80.93
GSMUA_Achr2P02090_001	Banana	cytosol	55.5	74.46
CDY15384	Canola	cytosol	26.03	53.29
PGSC0003DMT400018827	Potato	cytosol	44.15	50.93
Bra018247.1-P	Field mustard	nucleus	17.32	49.84
CDY19091	Canola	cytosol	41.05	49.11
VIT_07s0005g01660.t01	Wine grape	plastid	47.94	48.21
Solyc06g009520.2.1	Tomato	nucleus, plastid	45.64	47.32
CDY10802	Canola	plastid	44.04	45.23
CDY56616	Canola	plastid	40.83	45.12
Bra019526.1-P	Field mustard	cytosol	13.53	44.7
AT2G31400.1	Thale cress	plastid	45.53	43.25
Bra018246.1-P	Field mustard	plastid	22.94	40.49
KRH45156	Soybean	plastid	40.48	40.2
KRH01436	Soybean	plastid	40.02	39.89
Bra021733.1-P	Field mustard	cytosol	42.66	33.88
KXG36606	Sorghum	plastid	18.23	20.57
OQU90703	Sorghum	plastid	20.41	19.84
KXG40345	Sorghum	plastid	11.01	19.75
OQU77078	Sorghum	mitochondrion	11.01	19.43
KXG20531	Sorghum	plastid	17.2	19.33
EER87934	Sorghum	plastid	10.67	18.9
OQU86802	Sorghum	cytosol	6.54	18.45
KXG30749	Sorghum	plastid	10.44	18.27
EER99505	Sorghum	plastid	13.65	17.81
EER97871	Sorghum	plastid	11.35	17.68
KXG36530	Sorghum	plastid	15.94	16.97
OQU84443	Sorghum	cytosol	11.58	16.69
EES13486	Sorghum	plastid	10.32	14.95

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:C5YPS3	EnsemblPlants:EES16159	ProteinID:EES16159	ProteinID:EES16159.2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009982	GO:GO:0009987	GO:GO:0010019	GO:GO:0016787	GO:GO:0019239	GO:GO:0031119
GO:GO:0031930	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041
PFAM:PF13812	PFAM:PF17177	InterPro:PPR_long	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF366	InterPro:Pentatricopeptide_repeat	SMART:SM00463	EnsemblPlantsGene:SORBI_3008G130000	SUPFAM:SSF160443	InterPro:Smr_dom
InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00081AB3B1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:55570744..55574859

Molecular Weight (calculated)

94144.4 Da

IEP (calculated)

8.669

GRAVY (calculated)

0.010

Length

872 amino acids

Sequence
(BLAST)

001: MPTHFTPSQA HAASHHAAHH HHHSAAAAAA AVVTATATAR LHASAAPPAS ASAAGLCPPH LLAAASPAVS SSASAACPPA RSPIFVGPGA PWARQQPQRA
101: AAAAAALGPE FRRARTTKTI SKRTRGGGGG AQDRGRVASA AAGRCVEKLL RVAPEDRRGL GSALSSFRGD LLGPEDYCQV LRELGDRDKS ALRAFEVFYA
201: ALPLVGGGAV DKGKLLTAAI GALGKMGRPD LARRAFDSGI ADRYGNTVFA HSALISAYAR SGLATEAMGV LESMKGAGLR PTTVSYNAVI DACGKGGVDL
301: RFTLGYFRQM LQDGLCPDRK TFNSLLAACS RAGHLEDART VFDEMIHLGS GRDIYTYNTF VDAICKCGNM ELATQVVLDM EANNIKPNVV TYSTLMDGFS
401: KLEKYDEALK LREKMKSLGI QLDRVCYNTL LAIYVKTGKY DEIATVCEDM ENLGIEKDTV TYNSLINGYG KQGRLDMVAF LVQDMRAQGV APSVLTYSTL
501: IDIYSKAGMH GDAFNVYLDF KESGLKADVV LFSSFIDTLA KNGLVECALS LLDEMIKMGI KPNVVTYNTI IDAFGKSKIL TEEDPGNMGI VGVYGGQIVR
601: ATNPVTRGGR SATDVRMRRS QELFFILELF QKMVQQGVRP NVVTFSAILN ACSRCNNFED AALLLEQLRL FDNSVYGVAY GLLMGHLEAW SQARSLFNQL
701: GRMDSPTSSA FYNALTDVLW HFGQRQGAQQ VVLEGVNRRV WENTWGDFCL DLHLMSCGAA QAMVHAWLLN VRSIVFEGRA MPEFLSILTG WGKHSKIAGS
801: STLRRVIEAL LLSIGAPFQV ERFNIGRFVS PSALVAAWLR ESGTVNILLL RNERVQHANP SNLVPMLQAL QL

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.