Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G523700.1 | Wheat | plastid | 92.11 | 96.05 |
| TraesCSU01G054500.1 | Wheat | cytosol, plastid | 92.11 | 95.58 |
| TraesCS3D01G529200.1 | Wheat | plastid | 91.64 | 95.09 |
| Os08t0191900-01 | Rice | plastid | 77.44 | 80.62 |
| EES13486 | Sorghum | plastid | 76.03 | 80.07 |
| Zm00001d024248_P001 | Maize | plastid | 74.61 | 78.83 |
| PGSC0003DMT400041148 | Potato | plastid | 57.89 | 64.16 |
| Solyc07g043600.2.1 | Tomato | nucleus | 57.73 | 63.1 |
| CDY06027 | Canola | plastid | 52.84 | 63.09 |
| VIT_12s0028g01140.t01 | Wine grape | cytosol | 54.1 | 62.59 |
| CDX71917 | Canola | plastid | 53.47 | 62.2 |
| KRH36131 | Soybean | plastid | 53.15 | 60.94 |
| KRG90623 | Soybean | nucleus | 53.15 | 59.96 |
| AT3G59040.2 | Thale cress | endoplasmic reticulum | 53.15 | 57.12 |
| CDX98345 | Canola | cytosol | 22.87 | 46.62 |
| GSMUA_Achr8P07220_001 | Banana | cytosol | 67.03 | 39.06 |
| HORVU7Hr1G027800.8 | Barley | cytosol | 15.46 | 20.21 |
| HORVU4Hr1G086600.3 | Barley | plastid | 14.04 | 17.94 |
| HORVU2Hr1G035060.2 | Barley | cytosol | 15.93 | 16.16 |
| HORVU4Hr1G024360.2 | Barley | endoplasmic reticulum, vacuole | 14.67 | 16.09 |
| HORVU2Hr1G043170.1 | Barley | mitochondrion | 16.72 | 16.04 |
| HORVU6Hr1G032270.20 | Barley | cytosol, mitochondrion | 16.25 | 15.97 |
| HORVU0Hr1G007320.4 | Barley | cytosol | 11.04 | 15.18 |
| HORVU7Hr1G095190.4 | Barley | mitochondrion, plastid | 12.15 | 15.1 |
| HORVU6Hr1G075250.5 | Barley | plastid | 11.67 | 14.8 |
| HORVU7Hr1G111000.5 | Barley | plastid | 16.56 | 12.87 |
| HORVU5Hr1G022350.1 | Barley | plastid | 9.62 | 11.87 |
| HORVU2Hr1G056820.1 | Barley | plastid | 14.98 | 11.6 |
| HORVU5Hr1G114630.1 | Barley | mitochondrion | 14.98 | 11.4 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.4.6 | UniProt:A0A287MS96 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU3Hr1G114340 | EnsemblPlants:HORVU3Hr1G114340.4 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF13041 |
| PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF722 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B46CFF7 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:690841413..690845169
Molecular Weight (calculated)
71905.0 Da
IEP (calculated)
7.545
GRAVY (calculated)
-0.544
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: VRVCLPIRLP RASCSHRLLR RAPAMEAAMG TLGSQSPLSF SSSLCNAKAS CGWPVYNVKK VEGSQRLDVV CHGMLAPRKF VRKKREEEVF KDADDEAKQK
101: SWRKMMSEIE ESGSAVSSIL KTQRNTTGAL PRDTVLGTLV RFKQLKKWDL VSEILEWLRT QHWWDFSEMD FLMLVTAYGK LGDFSKAERV LKYMNKKGYR
201: PTVISQTALM EAYGRAKQYR KAEAVFHKMQ TSGPEPSPIT YQIILKSLVE GDKYKETEAI FKDLLNEKRA SFKPDQKMFH MMIYMYKKAG DYTQARKLFA
301: QMPERGIPQS TVTFNSLMSF EADYKEVSSI YDQMQRAGLK PDVVSYSLLI KAYGKARRED EALAVFEEML DAGIRPTRKS YNILLDAFAV SGLVEEARTV
401: FKTMRRHRVE PDLCSYTTML LAYVNASDMD GAEKFFRRIK DDGLRPNVVA YGTLMKGYSK LDDVEKVMRV YERMRMQGVE PNQTIFTTIM DVHGRNSDFG
501: NAVIWFNEME TRGYPPDKKA KNILLSLAKT PEEQEEANEL TGNGVVQLEV KPNGMPAGLG TNGAAGVHEA GLTDTARHDS LNGASTSDLN GGNRARSSGF
601: EDEDDDDDDY NEEMDDEELD LVSFKDKREL NFAT
101: SWRKMMSEIE ESGSAVSSIL KTQRNTTGAL PRDTVLGTLV RFKQLKKWDL VSEILEWLRT QHWWDFSEMD FLMLVTAYGK LGDFSKAERV LKYMNKKGYR
201: PTVISQTALM EAYGRAKQYR KAEAVFHKMQ TSGPEPSPIT YQIILKSLVE GDKYKETEAI FKDLLNEKRA SFKPDQKMFH MMIYMYKKAG DYTQARKLFA
301: QMPERGIPQS TVTFNSLMSF EADYKEVSSI YDQMQRAGLK PDVVSYSLLI KAYGKARRED EALAVFEEML DAGIRPTRKS YNILLDAFAV SGLVEEARTV
401: FKTMRRHRVE PDLCSYTTML LAYVNASDMD GAEKFFRRIK DDGLRPNVVA YGTLMKGYSK LDDVEKVMRV YERMRMQGVE PNQTIFTTIM DVHGRNSDFG
501: NAVIWFNEME TRGYPPDKKA KNILLSLAKT PEEQEEANEL TGNGVVQLEV KPNGMPAGLG TNGAAGVHEA GLTDTARHDS LNGASTSDLN GGNRARSSGF
601: EDEDDDDDDY NEEMDDEELD LVSFKDKREL NFAT
001: MFFSFRLLKV LVFHLQIRPC VLLCVSQRKL QNNIINVGVK IQNRFRVVCM GMLAPRKFLQ KRRKMEVFKD AADETDQKRW RGLMLEIEST GSAVPVLRQY
101: KTDGDQGLPR DLVLGTLVRF KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN VISYTALMES YGRGGKCNNA
201: EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301: SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA
401: YVNASDMEGA EKFFKRIKVD GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA LGWYKEMESC GVPPDQKAKN
501: VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL
101: KTDGDQGLPR DLVLGTLVRF KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN VISYTALMES YGRGGKCNNA
201: EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301: SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA
401: YVNASDMEGA EKFFKRIKVD GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA LGWYKEMESC GVPPDQKAKN
501: VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J741]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.