Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 72.8 | 97.85 |
| TraesCS2D01G193100.1 | Wheat | plastid | 97.76 | 77.05 |
| TraesCS2B01G212000.1 | Wheat | plastid | 97.92 | 76.98 |
| Os07t0590600-00 | Rice | plastid | 84.64 | 67.47 |
| KXG36606 | Sorghum | plastid | 82.88 | 67.01 |
| Zm00001d022003_P001 | Maize | plastid | 84.16 | 66.16 |
| GSMUA_Achr6P16830_001 | Banana | cytosol | 59.36 | 66.01 |
| CDX71198 | Canola | cytosol | 51.36 | 56.71 |
| KRH27571 | Soybean | plastid | 44.8 | 51.85 |
| VIT_03s0091g00440.t01 | Wine grape | plastid | 59.36 | 45.75 |
| Bra035290.1-P | Field mustard | plastid | 56.16 | 43.88 |
| CDY32056 | Canola | plastid | 56.16 | 43.39 |
| KRG91073 | Soybean | plastid | 54.88 | 43.2 |
| PGSC0003DMT400066525 | Potato | plastid | 56.64 | 43.01 |
| Solyc01g107320.2.1 | Tomato | plastid | 56.32 | 42.98 |
| AT5G02860.2 | Thale cress | plastid | 55.52 | 42.37 |
| HORVU7Hr1G111000.5 | Barley | plastid | 36.32 | 27.82 |
| HORVU7Hr1G027800.8 | Barley | cytosol | 18.56 | 23.92 |
| HORVU0Hr1G007320.4 | Barley | cytosol | 16.64 | 22.56 |
| HORVU7Hr1G095190.4 | Barley | mitochondrion, plastid | 17.44 | 21.37 |
| HORVU4Hr1G086600.3 | Barley | plastid | 16.96 | 21.37 |
| HORVU2Hr1G043170.1 | Barley | mitochondrion | 21.28 | 20.12 |
| HORVU6Hr1G032270.20 | Barley | cytosol, mitochondrion | 18.4 | 17.83 |
| HORVU6Hr1G075250.5 | Barley | plastid | 14.24 | 17.8 |
| HORVU2Hr1G056820.1 | Barley | plastid | 22.88 | 17.46 |
| HORVU5Hr1G022350.1 | Barley | plastid | 14.08 | 17.12 |
| HORVU4Hr1G024360.2 | Barley | endoplasmic reticulum, vacuole | 15.36 | 16.61 |
| HORVU5Hr1G114630.1 | Barley | mitochondrion | 22.08 | 16.57 |
| HORVU3Hr1G114340.4 | Barley | mitochondrion | 16.16 | 15.93 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.4.3 | UniProt:A0A287HP05 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU2Hr1G035060 | EnsemblPlants:HORVU2Hr1G035060.2 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 |
| PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF308 | InterPro:Pentatricopeptide_repeat |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B482AFE | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:145215509..145217864
Molecular Weight (calculated)
69935.3 Da
IEP (calculated)
7.826
GRAVY (calculated)
-0.207
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: LLDAAPEPDA SAYTALVSAF SRASRFRDAV AVFRRMVANG IQPAIVTYNV VLHVYSKIAV PWKDVVALVD SMKNDGIPLD RYTYNTLISC CRRGALYKEA
101: AKVFDEMRAA GFEPDKVTFN SLLDVYGKAR MHDEAIGVLK EMELGGCPPS VVTYNSLISS YVKDGLLKEA AELKEEMEVK GIQPDVITYT TLISGLDRAG
201: KIDAAIGTYD EMLRNGCKPN LCTYNALIKL HGVRGKFPEM MAVFDDLRSA GFVPDVVTWN TLLAVFGQNG LDSEVSGVFK EMKKSGYVPE RDTYVSLISS
301: YSRCGLFDQS MEIYKRMIEA GIYPDISTYN AVLSALARGG RWEQAEKLFA EMENLDCRPD ELSYSSLLHA YANAKKLDKM KALSEDIYAE KIESHHGLVK
401: TLVLVNSKVN NLSETEKAFL ELGRRRCSLD INVLNAMVSV YGKNRMVKKV EEILSLMKGS SINLSTATYN SLMHMYSRLG DCEKCENILT EIKSSGARPD
501: RYSYNTMIYA YGRKGQMKEA SRLFSEMKSS GLIPDIVTYN IFVKSYVANS MFEEAIDLVR YMVTRGCKPN ERTYNSILQE YCRHGKIADA KSFLSNLPQL
601: HPGISKQEQQ RLLELLARHT SRDGG
101: AKVFDEMRAA GFEPDKVTFN SLLDVYGKAR MHDEAIGVLK EMELGGCPPS VVTYNSLISS YVKDGLLKEA AELKEEMEVK GIQPDVITYT TLISGLDRAG
201: KIDAAIGTYD EMLRNGCKPN LCTYNALIKL HGVRGKFPEM MAVFDDLRSA GFVPDVVTWN TLLAVFGQNG LDSEVSGVFK EMKKSGYVPE RDTYVSLISS
301: YSRCGLFDQS MEIYKRMIEA GIYPDISTYN AVLSALARGG RWEQAEKLFA EMENLDCRPD ELSYSSLLHA YANAKKLDKM KALSEDIYAE KIESHHGLVK
401: TLVLVNSKVN NLSETEKAFL ELGRRRCSLD INVLNAMVSV YGKNRMVKKV EEILSLMKGS SINLSTATYN SLMHMYSRLG DCEKCENILT EIKSSGARPD
501: RYSYNTMIYA YGRKGQMKEA SRLFSEMKSS GLIPDIVTYN IFVKSYVANS MFEEAIDLVR YMVTRGCKPN ERTYNSILQE YCRHGKIADA KSFLSNLPQL
601: HPGISKQEQQ RLLELLARHT SRDGG
001: MADKLALPLL LPCTPSSKPY SHDQNHHISR TPFLTTSLSS PPPPPVEPLL HDVFLHQNPN SRQPISSQTS RNRNRTRIGK SRDPNLGKPW SYHGLSPQGQ
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g02860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYZ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.