Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G035060.2 | Barley | cytosol | 67.47 | 84.64 |
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 84.3 |
| TraesCS2D01G193100.1 | Wheat | plastid | 81.25 | 80.33 |
| KXG36606 | Sorghum | plastid | 79.08 | 80.21 |
| TraesCS2B01G212000.1 | Wheat | plastid | 80.61 | 79.5 |
| Zm00001d022003_P001 | Maize | plastid | 79.97 | 78.87 |
| GSMUA_Achr6P16830_001 | Banana | cytosol | 46.81 | 65.3 |
| CDX71198 | Canola | cytosol | 42.22 | 58.48 |
| KRH27571 | Soybean | plastid | 38.01 | 55.19 |
| VIT_03s0091g00440.t01 | Wine grape | plastid | 52.81 | 51.05 |
| PGSC0003DMT400066525 | Potato | plastid | 51.79 | 49.33 |
| CDY32056 | Canola | plastid | 50.77 | 49.2 |
| Bra035290.1-P | Field mustard | plastid | 50.13 | 49.12 |
| Solyc01g107320.2.1 | Tomato | plastid | 51.15 | 48.96 |
| AT5G02860.2 | Thale cress | plastid | 51.02 | 48.84 |
| KRG91073 | Soybean | plastid | 48.98 | 48.36 |
| Os05t0275000-01 | Rice | cytosol, plastid | 33.67 | 33.29 |
| Os03t0115300-00 | Rice | plastid | 15.43 | 24.69 |
| Os02t0170000-02 | Rice | cytosol | 14.29 | 23.88 |
| Os06t0710800-01 | Rice | cytosol | 14.92 | 23.78 |
| Os06t0172000-01 | Rice | plastid | 14.54 | 22.31 |
| Os07t0213300-01 | Rice | cytosol | 18.88 | 21.86 |
| Os07t0548300-01 | Rice | plastid | 17.09 | 20.78 |
| Os03t0309800-02 | Rice | plastid | 12.88 | 20.16 |
| Os02t0750400-01 | Rice | cytosol | 5.36 | 19.81 |
| Os03t0824100-01 | Rice | plastid | 19.52 | 17.63 |
| Os08t0191900-01 | Rice | plastid | 13.14 | 16.91 |
| Os12t0562300-01 | Rice | cytosol | 4.46 | 11.44 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.4.3 | EntrezGene:4343774 | ProteinID:BAC82993.1 | ProteinID:BAF22068.1 | ProteinID:BAT02434.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlantsGene:Os07g0590600 | EnsemblPlants:Os07t0590600-00 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF308 | InterPro:Pentatricopeptide_repeat | UniProt:Q6ZLH4 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI00001BF17D | RefSeq:XP_015645427.1 | SEG:seg | : | : | : |
Description
Tetratricopeptide-like helical domain containing protein. (Os07t0590600-00)
Coordinates
chr7:+:24071176..24073668
Molecular Weight (calculated)
86767.7 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.206
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTLAFPLP LRAPAPPPSS PISQASAHSS PPPRIFSLLS SSHPAPSSST SRKPRLGRPG GGGQQPWHLP PSLSLPARRA LLALLDDPGR ATSPRDLLSG
101: LPAPELAAVV GALGSRGQPG AALAALHAAR ELHGEGVLHH PRVLATAIRV MARAGRLAEA SALLDAAPGP DAGAYTALVS AFSRAGRFRD AVAVFRRMVD
201: SGVQPAIVTY NVVLHVYSKM AVPWKEVVEL VASMKEHGVA PDRYTYNTLI SCCRRRALYK EAAQVFDEMK ASGFEPDKVT FNSLLDVYGK ARRHDEAIEV
301: IQEMERVGCP PSVVTYNSLI SSYVKDGLLE QAVALKQEME VKGMKPDVVT YTTLISGLDR AGKIDAAIVE YDEMVRNGCK PNLCTYNALI KMHGVRGKFP
401: EMMAVFDEFR SAGFVPDIVT WNTLLAVFGQ NGLDSEVSGV FKEMKKAGYI PERDTYVSLI SSYSRCGLFD LAMQIYKRMM EAGIYPDVST YNAVLSALAR
501: GGRWEQAEKL FAEMEERDCK PDEYSYSSLL HAYANAKRLD KMKALSDDIY SERIEPHNWL VKTLVLVNSK VNNLAEAEKA FLELRQKRCS LDINVLNAMV
601: SIYGKNRMVR KVEKILSLMK ESAINLSAAT YNSLMHMYSR LGDCEKCENI LTEIKSSGVR PDRYSYNTVI YAYGRKGQMK EASRLFSEMK CSGLKPDVVT
701: YNIFVKSYVS NSMFEEAIEL VRYMVTQGCK PNERTYNSIV EGYCRNGKLT DAKIFVSNLP QLHPGYSKQE QQNLFEVIAK YTQR
101: LPAPELAAVV GALGSRGQPG AALAALHAAR ELHGEGVLHH PRVLATAIRV MARAGRLAEA SALLDAAPGP DAGAYTALVS AFSRAGRFRD AVAVFRRMVD
201: SGVQPAIVTY NVVLHVYSKM AVPWKEVVEL VASMKEHGVA PDRYTYNTLI SCCRRRALYK EAAQVFDEMK ASGFEPDKVT FNSLLDVYGK ARRHDEAIEV
301: IQEMERVGCP PSVVTYNSLI SSYVKDGLLE QAVALKQEME VKGMKPDVVT YTTLISGLDR AGKIDAAIVE YDEMVRNGCK PNLCTYNALI KMHGVRGKFP
401: EMMAVFDEFR SAGFVPDIVT WNTLLAVFGQ NGLDSEVSGV FKEMKKAGYI PERDTYVSLI SSYSRCGLFD LAMQIYKRMM EAGIYPDVST YNAVLSALAR
501: GGRWEQAEKL FAEMEERDCK PDEYSYSSLL HAYANAKRLD KMKALSDDIY SERIEPHNWL VKTLVLVNSK VNNLAEAEKA FLELRQKRCS LDINVLNAMV
601: SIYGKNRMVR KVEKILSLMK ESAINLSAAT YNSLMHMYSR LGDCEKCENI LTEIKSSGVR PDRYSYNTVI YAYGRKGQMK EASRLFSEMK CSGLKPDVVT
701: YNIFVKSYVS NSMFEEAIEL VRYMVTQGCK PNERTYNSIV EGYCRNGKLT DAKIFVSNLP QLHPGYSKQE QQNLFEVIAK YTQR
001: MADKLALPLL LPCTPSSKPY SHDQNHHISR TPFLTTSLSS PPPPPVEPLL HDVFLHQNPN SRQPISSQTS RNRNRTRIGK SRDPNLGKPW SYHGLSPQGQ
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g02860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYZ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.