Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G529200.1 | Wheat | plastid | 97.55 | 97.55 |
| TraesCS3A01G523700.1 | Wheat | plastid | 96.89 | 97.37 |
| HORVU3Hr1G114340.4 | Barley | mitochondrion | 95.58 | 92.11 |
| EES13486 | Sorghum | plastid | 80.03 | 81.23 |
| Os08t0191900-01 | Rice | plastid | 80.85 | 81.12 |
| Zm00001d024248_P001 | Maize | plastid | 77.91 | 79.33 |
| PGSC0003DMT400041148 | Potato | plastid | 59.74 | 63.81 |
| CDY06027 | Canola | plastid | 54.99 | 63.28 |
| Solyc07g043600.2.1 | Tomato | nucleus | 59.57 | 62.76 |
| VIT_12s0028g01140.t01 | Wine grape | cytosol | 56.14 | 62.59 |
| CDX71917 | Canola | plastid | 55.65 | 62.39 |
| KRH36131 | Soybean | plastid | 54.99 | 60.76 |
| KRG90623 | Soybean | nucleus | 55.16 | 59.96 |
| AT3G59040.2 | Thale cress | endoplasmic reticulum | 55.48 | 57.46 |
| CDX98345 | Canola | cytosol | 24.39 | 47.91 |
| GSMUA_Achr8P07220_001 | Banana | cytosol | 68.09 | 38.24 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.4.6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002885 |
| InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF722 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCSU01G054500 |
| EnsemblPlants:TraesCSU01G054500.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:42590673..42594425
Molecular Weight (calculated)
69425.4 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.593
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAMGTLGS QSPLSFSSSL CNAKASCGWP VYNVKKIEGG QRLDVVCHGM LAPRKFVRKK RQEEVFKDAD DEAKQKSWRR MMSEIEESGS AVSSILKTQR
101: NTTGTLPRDT VLGTLVRFKQ LRKWNLVSEI LEWLRTQHWW DFSEMDFLML VTAYGKLGDF SRAERVLKYM NKKGYRPTVI SQTALMEAYG RAKQYRKAEA
201: VFHKMQTSGP EPSPITYQII LKSLVEGDKY KEAEAIFEDL LNEKRASFKP DQKMFHMMIY MYKKAGDYTQ ARKLFAQMPE RGIPQSTVTF NSLMSFEADY
301: KEVSSIYDQM QRAGLKPDVV SYSLLIKAYG KARREDEALA VFEEMLDAGI RPTRKSYNIL LDAFAVSGLV EEARTVFKTM RRHRVEPDLC SYTTMLLAYV
401: NASDMDGSEK FFRRIKDDGL RPNVVAYGTL MKGYSKLDDV EKVMRVYERM RMQGVEPNQT IFTTIMDAHG RNSDFGNAVI WFNEMETRGY PPDKKAKNIL
501: LSLAKTPEEQ EEANELTGNG AVQLEVKPNG VPASLGTKGA DVDEAGLTDS TAHHHSLNGA STSDLNGRNR AGSSGFEDEE DDDDDDDYEE MDDEDLDFVS
601: FKDKRELNFA T
101: NTTGTLPRDT VLGTLVRFKQ LRKWNLVSEI LEWLRTQHWW DFSEMDFLML VTAYGKLGDF SRAERVLKYM NKKGYRPTVI SQTALMEAYG RAKQYRKAEA
201: VFHKMQTSGP EPSPITYQII LKSLVEGDKY KEAEAIFEDL LNEKRASFKP DQKMFHMMIY MYKKAGDYTQ ARKLFAQMPE RGIPQSTVTF NSLMSFEADY
301: KEVSSIYDQM QRAGLKPDVV SYSLLIKAYG KARREDEALA VFEEMLDAGI RPTRKSYNIL LDAFAVSGLV EEARTVFKTM RRHRVEPDLC SYTTMLLAYV
401: NASDMDGSEK FFRRIKDDGL RPNVVAYGTL MKGYSKLDDV EKVMRVYERM RMQGVEPNQT IFTTIMDAHG RNSDFGNAVI WFNEMETRGY PPDKKAKNIL
501: LSLAKTPEEQ EEANELTGNG AVQLEVKPNG VPASLGTKGA DVDEAGLTDS TAHHHSLNGA STSDLNGRNR AGSSGFEDEE DDDDDDDYEE MDDEDLDFVS
601: FKDKRELNFA T
001: MSQAVIFKPF VSVPSSNHSQ RKLQNNIINV GVKIQNRFRV VCMGMLAPRK FLQKRRKMEV FKDAADETDQ KRWRGLMLEI ESTGSAVPVL RQYKTDGDQG
101: LPRDLVLGTL VRFKQLKKWN LVSEILEWLR YQNWWNFSEI DFLMLITAYG KLGNFNGAER VLSVLSKMGS TPNVISYTAL MESYGRGGKC NNAEAIFRRM
201: QSSGPEPSAI TYQIILKTFV EGDKFKEAEE VFETLLDEKK SPLKPDQKMY HMMIYMYKKA GNYEKARKVF SSMVGKGVPQ STVTYNSLMS FETSYKEVSK
301: IYDQMQRSDI QPDVVSYALL IKAYGRARRE EEALSVFEEM LDAGVRPTHK AYNILLDAFA ISGMVEQAKT VFKSMRRDRI FPDLWSYTTM LSAYVNASDM
401: EGAEKFFKRI KVDGFEPNIV TYGTLIKGYA KANDVEKMME VYEKMRLSGI KANQTILTTI MDASGRCKNF GSALGWYKEM ESCGVPPDQK AKNVLLSLAS
501: TQDELEEAKE LTGIRNETAT IIARVYGSDD DEEGVEDISS ESSDDEDEGD DDDDDARETV LYDKPQEGSL GYGSLQTEEL VGL
101: LPRDLVLGTL VRFKQLKKWN LVSEILEWLR YQNWWNFSEI DFLMLITAYG KLGNFNGAER VLSVLSKMGS TPNVISYTAL MESYGRGGKC NNAEAIFRRM
201: QSSGPEPSAI TYQIILKTFV EGDKFKEAEE VFETLLDEKK SPLKPDQKMY HMMIYMYKKA GNYEKARKVF SSMVGKGVPQ STVTYNSLMS FETSYKEVSK
301: IYDQMQRSDI QPDVVSYALL IKAYGRARRE EEALSVFEEM LDAGVRPTHK AYNILLDAFA ISGMVEQAKT VFKSMRRDRI FPDLWSYTTM LSAYVNASDM
401: EGAEKFFKRI KVDGFEPNIV TYGTLIKGYA KANDVEKMME VYEKMRLSGI KANQTILTTI MDASGRCKNF GSALGWYKEM ESCGVPPDQK AKNVLLSLAS
501: TQDELEEAKE LTGIRNETAT IIARVYGSDD DEEGVEDISS ESSDDEDEGD DDDDDARETV LYDKPQEGSL GYGSLQTEEL VGL
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J741]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.