CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38862	Canola	mitochondrion	87.06	75.51
AT5G51440.1	Thale cress	mitochondrion	71.18	57.62
CDX89437	Canola	mitochondrion	64.71	51.64
CDY03368	Canola	mitochondrion	64.71	51.64
CDX99920	Canola	mitochondrion	47.65	50.62
CDY00476	Canola	mitochondrion	42.35	44.72
VIT_16s0022g00510.t01	Wine grape	mitochondrion	52.35	42.79
KRH23958	Soybean	mitochondrion	52.35	41.98
Solyc08g078700.2.1	Tomato	plastid	47.65	38.57
PGSC0003DMT400012249	Potato	mitochondrion	47.65	38.39
GSMUA_Achr10P...	Banana	mitochondrion	47.65	37.5
KRH39841	Soybean	mitochondrion	30.0	34.69
TraesCS7D01G178900.1	Wheat	cytosol	24.71	34.43
TraesCS6A01G316200.1	Wheat	mitochondrion	40.59	32.09
TraesCS6D01G295500.1	Wheat	mitochondrion	40.0	31.48
Os02t0758000-01	Rice	plastid	40.59	31.36
OQU85385	Sorghum	mitochondrion	40.59	31.22
TraesCS6B01G346700.1	Wheat	mitochondrion	39.41	31.16
TraesCS7B01G083300.1	Wheat	cytosol	23.53	30.08
Zm00001d052194_P001	Maize	mitochondrion	37.06	28.9
HORVU7Hr1G036500.7	Barley	plastid	34.12	28.43
TraesCS7A01G236700.1	Wheat	plastid	35.29	28.3
TraesCS7D01G179300.1	Wheat	plastid	34.71	27.83
TraesCS7B01G083100.1	Wheat	plastid	34.71	27.7
TraesCS7D01G179500.1	Wheat	plastid	34.71	27.44
TraesCS7D01G179200.1	Wheat	cytosol, plastid	33.53	27.27
TraesCS7A01G177600.1	Wheat	plastid	33.53	26.51
TraesCS7A01G177700.1	Wheat	cytosol, plastid	33.53	26.39
TraesCS7A01G177500.1	Wheat	cytosol, plastid	33.53	26.39
TraesCS7D01G232600.1	Wheat	plastid	32.35	26.32
TraesCS7D01G179000.1	Wheat	plastid	32.94	26.29
TraesCS7B01G083200.2	Wheat	plastid	34.12	26.24
OQU76071	Sorghum	plastid	31.18	26.24
TraesCS7D01G179400.1	Wheat	plastid	32.35	26.19
TraesCS7B01G083500.1	Wheat	mitochondrion	35.88	26.18
TraesCS7D01G179600.1	Wheat	mitochondrion	35.29	25.64
TraesCS7D01G179100.1	Wheat	plastid	32.35	25.58
TraesCS7B01G082900.1	Wheat	plastid	30.0	25.5
TraesCS7B01G083400.1	Wheat	plastid	31.76	25.35
HORVU7Hr1G036570.2	Barley	cytosol	32.94	25.34
TraesCS7A01G232500.1	Wheat	plastid	30.0	24.76
TraesCS2B01G531300.1	Wheat	plastid	25.29	24.43
HORVU7Hr1G036470.3	Barley	cytosol, nucleus	34.12	23.97
OQU75930	Sorghum	plastid	31.18	23.77
OQU75612	Sorghum	plastid	31.18	23.77
HORVU7Hr1G036540.3	Barley	mitochondrion, nucleus, plastid	35.88	23.64
EER89431	Sorghum	plastid	29.41	23.04
Zm00001d044874_P001	Maize	cytosol, plastid	27.65	22.6
KXG19616	Sorghum	plastid	34.12	21.56
TraesCS7A01G177800.1	Wheat	nucleus	28.24	20.87
EER89430	Sorghum	plastid	27.06	20.26
HORVU6Hr1G077710.3	Barley	cytosol	31.76	19.78
TraesCS7B01G130900.1	Wheat	plastid	18.82	19.75
Os06t0219500-00	Rice	mitochondrion	31.76	17.48
TraesCS5B01G123900.1	Wheat	plastid	20.59	14.64

Protein Annotations

EnsemblPlants:CDY32630	EnsemblPlantsGene:GSBRNA2T00052662001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF238	PFAM:PF00011	PFscan:PS01031
ProteinID:CDY32630	ProteinID:CDY32630.1	SEG:seg	SUPFAM:SSF49764	UniParc:UPI0004EF39FD	UniProt:A0A078H1V7
MapMan:35.1	:	:	:	:	:

Description

BnaC03g15980DBnaC03g15980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1V7]

Coordinates

chrLK032297:-:332342..333194

Molecular Weight (calculated)

19011.5 Da

IEP (calculated)

9.831

GRAVY (calculated)

-0.664

Length

170 amino acids

Sequence
(BLAST)

001: MASSTSLALR RLISSSVVPR SVRPAASLRL FNTNAARSYE EGDNRNHRPN RTVSPRGGDF FSDMFTPTRS LSQVLNFMDQ IGESPLLASS GARRGWDLAL
101: EQNTLVIKGE GKTEEGDEDD GRKFSSRIGL PEKVYKTDEI KAEMKNGVLK VVVPKLKEDE RYNVRHIQVD

Best Arabidopsis Sequence Match ( AT5G51440.1 )
(BLAST)

001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD

Arabidopsis Description

HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.