Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G295500.1 | Wheat | mitochondrion | 95.81 | 95.37 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 88.84 | 88.84 |
| Os02t0758000-01 | Rice | plastid | 66.05 | 64.55 |
| OQU85385 | Sorghum | mitochondrion | 64.19 | 62.44 |
| Zm00001d052194_P001 | Maize | mitochondrion | 63.26 | 62.39 |
| GSMUA_Achr10P... | Banana | mitochondrion | 48.84 | 48.61 |
| KRH39841 | Soybean | mitochondrion | 32.09 | 46.94 |
| TraesCS7A01G236700.1 | Wheat | plastid | 45.58 | 46.23 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 46.05 | 45.83 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 46.05 | 45.83 |
| HORVU6Hr1G077710.3 | Barley | cytosol | 57.67 | 45.42 |
| TraesCS7A01G232500.1 | Wheat | plastid | 42.33 | 44.17 |
| KRH23958 | Soybean | mitochondrion | 43.26 | 43.87 |
| Solyc08g078700.2.1 | Tomato | plastid | 42.79 | 43.81 |
| TraesCS7A01G177600.1 | Wheat | plastid | 43.72 | 43.72 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 42.79 | 43.6 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 40.0 | 42.79 |
| CDY38862 | Canola | mitochondrion | 37.67 | 41.33 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 38.6 | 41.29 |
| Bra029174.1-P | Field mustard | mitochondrion | 37.67 | 41.12 |
| CDY32630 | Canola | mitochondrion | 32.09 | 40.59 |
| AT5G51440.1 | Thale cress | mitochondrion | 39.07 | 40.0 |
| AT4G25200.1 | Thale cress | mitochondrion | 38.6 | 39.52 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 38.14 | 39.42 |
| CDY00476 | Canola | mitochondrion | 29.3 | 39.13 |
| CDX99920 | Canola | mitochondrion | 28.84 | 38.75 |
| Bra028253.1-P | Field mustard | mitochondrion | 28.37 | 37.89 |
| CDX89437 | Canola | mitochondrion | 37.21 | 37.56 |
| Bra013872.1-P | Field mustard | mitochondrion | 37.21 | 37.56 |
| CDY03368 | Canola | mitochondrion | 36.74 | 37.09 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 37.67 | 35.22 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 23.72 | 26.02 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 22.79 | 25.13 |
| PGSC0003DMT400012246 | Potato | plastid | 17.67 | 22.35 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 17.21 | 22.02 |
Protein Annotations
| MapMan:19.1.8.8 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009628 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 |
| PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF176 | SUPFAM:SSF49764 | EnsemblPlantsGene:TraesCS6A01G316200 |
| EnsemblPlants:TraesCS6A01G316200.1 | TIGR:cd00298 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:-:552757981..552758757
Molecular Weight (calculated)
23448.8 Da
IEP (calculated)
8.877
GRAVY (calculated)
-0.485
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRVVFSNR IPLVRAMENL LAASSGSALR PAAVAGGVRG YNAGAPLRSY DRDEAVERSP RSGARERDVG VPSFFSDVFR DPFSAPQSLG RLLSMLDDVA
101: AASPDGAARA APLRRGWNAR EDADAPRLRV DMPGLGKEHV KVWAEQNSLV IKGEGEKESD REGADAPRYS GRLELAGDVY RMDQIKAEMK NGVLRVVVPK
201: VKEEERKDVF EVKVD
101: AASPDGAARA APLRRGWNAR EDADAPRLRV DMPGLGKEHV KVWAEQNSLV IKGEGEKESD REGADAPRYS GRLELAGDVY RMDQIKAEMK NGVLRVVVPK
201: VKEEERKDVF EVKVD
001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
Arabidopsis Description
HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.