Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G122340.3 | Barley | nucleus | 69.06 | 60.74 |
| Zm00001d018515_P002 | Maize | nucleus | 59.93 | 47.42 |
| OQU85994 | Sorghum | nucleus | 61.89 | 47.38 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 59.93 | 46.0 |
| KRH05193 | Soybean | plastid | 20.52 | 42.86 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 43.65 | 38.84 |
| KRH48165 | Soybean | nucleus | 41.69 | 37.65 |
| KRH65066 | Soybean | nucleus | 41.69 | 37.65 |
| KRH40471 | Soybean | nucleus | 41.37 | 37.24 |
| KRH00715 | Soybean | nucleus | 41.04 | 36.84 |
| PGSC0003DMT400000467 | Potato | nucleus | 40.39 | 36.58 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 62.87 | 36.35 |
| Solyc01g094460.2.1 | Tomato | nucleus | 40.07 | 36.28 |
| Bra025511.1-P | Field mustard | nucleus | 31.92 | 35.38 |
| Bra014444.1-P | Field mustard | nucleus | 38.11 | 35.14 |
| CDY42495 | Canola | nucleus | 38.44 | 34.91 |
| Solyc08g080960.2.1 | Tomato | nucleus | 37.78 | 34.73 |
| CDX89109 | Canola | nucleus | 37.46 | 34.33 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 38.44 | 34.1 |
| CDY37070 | Canola | nucleus | 37.13 | 33.43 |
| Bra039309.1-P | Field mustard | nucleus | 37.13 | 33.43 |
| AT2G45850.1 | Thale cress | nucleus | 37.78 | 33.33 |
| CDY58791 | Canola | nucleus | 35.5 | 33.23 |
| CDY27354 | Canola | nucleus | 37.46 | 32.95 |
| CDY51561 | Canola | nucleus | 36.48 | 32.94 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 37.46 | 32.49 |
| Bra007595.1-P | Field mustard | nucleus | 35.83 | 32.26 |
| CDY48928 | Canola | nucleus | 35.83 | 31.98 |
| PGSC0003DMT400014926 | Potato | plastid | 35.83 | 31.88 |
| Solyc08g008030.2.1 | Tomato | nucleus | 35.83 | 31.79 |
| CDX71746 | Canola | nucleus | 35.5 | 31.69 |
| KRH27929 | Soybean | nucleus | 35.5 | 30.97 |
| Bra003446.1-P | Field mustard | nucleus | 33.88 | 30.68 |
| KRH41165 | Soybean | nucleus | 34.53 | 30.11 |
| KRH77536 | Soybean | nucleus | 34.85 | 29.97 |
| CDY25500 | Canola | nucleus | 35.83 | 29.73 |
| KRH59866 | Soybean | nucleus | 33.88 | 29.55 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 18.89 | 29.44 |
| PGSC0003DMT400031843 | Potato | plastid | 36.81 | 29.43 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 34.53 | 29.28 |
| Bra027642.1-P | Field mustard | nucleus | 35.5 | 28.61 |
| AT1G63470.1 | Thale cress | nucleus | 35.18 | 28.57 |
| CDY34355 | Canola | nucleus | 35.18 | 28.57 |
| CDY45364 | Canola | nucleus | 33.88 | 28.34 |
| TraesCS2A01G449500.1 | Wheat | plastid | 37.78 | 28.29 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 33.88 | 28.11 |
| Bra027801.1-P | Field mustard | nucleus | 34.2 | 28.0 |
| TraesCS5A01G130500.1 | Wheat | plastid | 32.57 | 27.1 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 34.85 | 26.95 |
| AT1G63480.1 | Thale cress | nucleus | 30.94 | 26.32 |
| CDY39751 | Canola | nucleus | 32.57 | 26.18 |
| CDY46385 | Canola | nucleus | 31.92 | 25.65 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 37.78 | 25.55 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 33.22 | 25.25 |
| TraesCS7A01G315100.1 | Wheat | plastid | 30.62 | 23.62 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 30.29 | 23.48 |
| TraesCS5A01G266900.1 | Wheat | cytosol | 0.65 | 1.71 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G565900.1 | EnsemblPlantsGene:TraesCS7A01G565900 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF41 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:735399182..735402390
Molecular Weight (calculated)
31115.0 Da
IEP (calculated)
7.426
GRAVY (calculated)
-0.317
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPDPHIPHA PMGPSPPAAA DDLGRKKRGR PRKYKPDGSG PVAPSPSPAA PSPCTAIVPV TPGSGGGPSS EKRRGRPPGS GKMQQLASLG KSFLGTVGTG
101: FTPHVIIIPS GEDVAARIMS FSQQGPRAVC IMSASGAVST ATLHQDAGSG SVVKYEGRFE ILCLSGSYLV IDDGVTRTRN GGLCIALCGA DHRVIGGSVG
201: GVLTAAGTVQ VIVGSFMYAG SKKSRKGKAG QESTAAEEEQ TGDANGGSGG DGVGVGGEAE EEGPSPLMPM PRGEEELPSD GMMSGWTGMM RQMESRSCGI
301: DINSIRE
101: FTPHVIIIPS GEDVAARIMS FSQQGPRAVC IMSASGAVST ATLHQDAGSG SVVKYEGRFE ILCLSGSYLV IDDGVTRTRN GGLCIALCGA DHRVIGGSVG
201: GVLTAAGTVQ VIVGSFMYAG SKKSRKGKAG QESTAAEEEQ TGDANGGSGG DGVGVGGEAE EEGPSPLMPM PRGEEELPSD GMMSGWTGMM RQMESRSCGI
301: DINSIRE
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.