Factsheet for Bra014444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003446.1-P
Bra007595.1-P
Bra014444.1-P
Bra018956.1-P
Bra030396.1-P
Bra033121.1-P
Bra039309.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61310.1	Bra018956.1-P	AT1G52240.1	21798944
AT3G61310.1	Bra030396.1-P	AT1G52240.1	21798944
AT3G61310.1	Bra039309.1-P	AT2G45850.1	21798944
AT3G61310.1	Bra003446.1-P	AT3G61310.1	21798944
AT3G61310.1	Bra007595.1-P	AT3G61310.1	21798944
AT3G61310.1	Bra014444.1-P	AT3G61310.1	21798944
AT3G61310.1	Bra033121.1-P	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89109	Canola	nucleus	98.5	97.91
Bra007595.1-P	Field mustard	nucleus	82.58	80.65
AT3G61310.1	Thale cress	nucleus, plastid	80.48	75.71
Bra003446.1-P	Field mustard	nucleus	71.17	69.91
Bra039309.1-P	Field mustard	nucleus	65.17	63.64
KRH65066	Soybean	nucleus	53.45	52.35
KRH48165	Soybean	nucleus	52.55	51.47
KRH40471	Soybean	nucleus	51.95	50.73
KRH00715	Soybean	nucleus	51.65	50.29
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	51.95	50.14
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	47.75	47.75
PGSC0003DMT400000467	Potato	nucleus	46.55	45.72
Solyc01g094460.2.1	Tomato	nucleus	46.25	45.43
GSMUA_Achr8P11400_001	Banana	nucleus	46.85	45.09
GSMUA_Achr11P...	Banana	nucleus	47.75	42.86
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	24.92	42.35
GSMUA_Achr11P...	Banana	nucleus	46.85	41.6
Bra025511.1-P	Field mustard	nucleus	32.43	38.99
GSMUA_Achr4P30000_001	Banana	nucleus	37.84	38.65
Bra027642.1-P	Field mustard	nucleus	44.14	38.58
TraesCS7A01G565900.1	Wheat	nucleus	35.14	38.11
Bra027801.1-P	Field mustard	nucleus	42.64	37.87
HORVU2Hr1G123730.3	Barley	plastid	23.42	37.14
Bra022946.1-P	Field mustard	nucleus	29.13	37.02
Zm00001d018515_P002	Maize	nucleus	42.04	36.08
OQU85994	Sorghum	nucleus	42.34	35.16
Os02t0824300-01	Rice	nucleus	41.14	34.77
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	40.24	33.5
Bra019359.1-P	Field mustard	nucleus	31.53	31.91
Bra013646.1-P	Field mustard	nucleus	27.93	30.49
Bra037321.1-P	Field mustard	nucleus	28.83	30.38
Bra033121.1-P	Field mustard	nucleus	27.93	30.0
Bra025717.1-P	Field mustard	nucleus	26.73	29.37
TraesCS6B01G447600.1	Wheat	nucleus	41.14	29.09
Zm00001d026652_P001	Maize	plastid	34.53	28.97
Bra025716.1-P	Field mustard	nucleus	23.12	28.62
Bra021865.1-P	Field mustard	nucleus	29.43	28.0
TraesCS2A01G582300.1	Wheat	nucleus	33.93	27.97
TraesCS2B01G604700.1	Wheat	nucleus	33.63	27.79
KXG27470	Sorghum	nucleus	34.83	27.75
Bra017536.1-P	Field mustard	nucleus	29.13	27.48
Os04t0683900-01	Rice	nucleus	34.53	27.45
Bra021027.1-P	Field mustard	nucleus	33.63	27.32
Bra025718.1-P	Field mustard	nucleus, plastid	24.92	27.3
TraesCS2D01G597900.1	Wheat	cytosol, nucleus, plasma membrane, plastid	33.03	27.16
HORVU7Hr1G122340.3	Barley	nucleus	28.23	26.93
TraesCS6A01G403700.1	Wheat	nucleus	42.94	26.93
Bra040133.1-P	Field mustard	nucleus	30.33	26.37
Zm00001d001784_P002	Maize	nucleus	34.23	26.21
Bra013886.1-P	Field mustard	nucleus	29.13	25.46
Bra020612.1-P	Field mustard	nucleus	26.73	25.28
Bra019174.1-P	Field mustard	nucleus	29.73	25.0
Bra029164.1-P	Field mustard	nucleus	31.53	24.76
Bra013270.1-P	Field mustard	nucleus	31.53	24.65
Bra035899.1-P	Field mustard	nucleus	28.53	24.23
Bra028265.1-P	Field mustard	nucleus	30.63	23.78
Bra022555.1-P	Field mustard	nucleus	29.73	23.63
Bra009999.1-P	Field mustard	nucleus	26.13	23.39
Bra010070.1-P	Field mustard	nucleus	27.63	22.83
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	26.43	21.95

Protein Annotations

EnsemblPlants:Bra014444.1	EnsemblPlants:Bra014444.1-P	EnsemblPlantsGene:Bra014444	Gene3D:3.30.1330.80	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:AT_hook_DNA-bd_motif	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF44	PFAM:PF03479	PFscan:PS51742	SEG:seg	SMART:SM00384	SUPFAM:SSF117856
UniParc:UPI0002543A0F	UniProt:M4DD76	MapMan:35.1	:	:	:

Description

AT3G61310 (E=2e-091) | DNA-binding family protein

Coordinates

chrA04:+:668944..670455

Molecular Weight (calculated)

34929.3 Da

IEP (calculated)

9.813

GRAVY (calculated)

-0.409

Length

333 amino acids

Sequence
(BLAST)

001: MDRREAMGSY FIQRGMPGPG PPPPPSQTQQ PFQGSQGFHH FSNPNYQTQG GGSTGFVSPP LQMESSPVDS SAVAPPPPGE TSLKRKRGRP RKYGQDGSVS
101: LALSPSVGSS SMSPNSNKRG RGRPPGSGKK QRLASIGDLM PSSSGMSFTP HVIVVSVGED IASKVLSFSQ QGPRAICVLS VIGAVSTATL IQPAPSHGAI
201: TYEGRFELVS LSLSYLNSND NDYSTRTGNL AVSLASSDGR VIGGGIGGPL IAASHVQVIV GSFLWAVPKG KIKKRDEDVQ DTDALENNND NTAAPASPPV
301: PQSLVQTPVG MWSTGSRSMD MHHAHMDIDL MRG

Best Arabidopsis Sequence Match ( AT3G61310.1 )
(BLAST)

001: MDRRDAMALS GSGSYYIQRG IPGSGPPPPQ TQPTFHGSQG FHHFTNSISP FGSNPNPNPN PGGVSTGFVS PPLPVDSSPA DSSAAAAGAL VAPPSGDTSV
101: KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA
201: VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD
301: TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID LMRG

Arabidopsis Description

AHL11AT-hook motif nuclear-localized protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7L5]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.