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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G015180.2
HORVU1Hr1G049980.12
HORVU1Hr1G075570.2
HORVU1Hr1G075600.2
HORVU1Hr1G086590.2
HORVU2Hr1G048590.3
HORVU2Hr1G073450.7
HORVU2Hr1G105800.13
HORVU2Hr1G123730.3
HORVU3Hr1G062030.1
HORVU3Hr1G070490.1
HORVU3Hr1G070510.2
HORVU3Hr1G073200.1
HORVU5Hr1G053460.1
HORVU7Hr1G022570.1
HORVU7Hr1G040070.1
HORVU7Hr1G065300.2
HORVU7Hr1G122340.3

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63480.1 HORVU2Hr1G123730.3 AT3G61310.1 21798944
AT1G63480.1 HORVU7Hr1G122340.3 AT3G61310.1 21798944
AT1G63480.1 HORVU1Hr1G075570.2 AT5G56600.1 21798944
AT1G63480.1 HORVU1Hr1G075600.2 AT5G56600.1 21798944
AT1G63480.1 HORVU2Hr1G048590.3 AT5G56600.1 21798944
AT1G63480.1 HORVU2Hr1G073450.7 AT5G56600.1 21798944
AT1G63480.1 HORVU3Hr1G070490.1 AT5G56600.1 21798944
AT1G63480.1 HORVU3Hr1G070510.2 AT5G56600.1 21798944
AT1G63480.1 HORVU5Hr1G053460.1 AT5G56600.1 21798944
AT1G63480.1 HORVU7Hr1G022570.1 AT5G56600.1 21798944
AT1G63480.1 HORVU7Hr1G040070.1 AT5G56600.1 21798944
AT2G45850.1 HORVU0Hr1G015180.2 AT4G12080.1 21798944
AT2G45850.1 HORVU1Hr1G049980.12 AT4G17950.1 21798944
AT2G45850.1 HORVU2Hr1G105800.13 AT4G17950.1 21798944
AT2G45850.1 HORVU7Hr1G065300.2 AT4G17950.1 21798944
AT3G61310.1 HORVU1Hr1G086590.2 AT1G52240.1 21798944
AT3G61310.1 HORVU3Hr1G062030.1 AT1G52240.1 21798944
AT3G61310.1 HORVU3Hr1G073200.1 AT1G52240.1 21798944
AT3G61310.1 HORVU2Hr1G123730.3 AT2G45850.1 21798944
AT3G61310.1 HORVU7Hr1G122340.3 AT2G45850.1 21798944
AT3G61310.1 HORVU2Hr1G123730.3 AT3G61310.1 21798944
AT3G61310.1 HORVU7Hr1G122340.3 AT3G61310.1 21798944
AT3G61310.1 HORVU0Hr1G015180.2 AT4G12080.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G582300.1 Wheat nucleus 93.81 48.76
TraesCS2D01G597900.1 Wheat cytosol, nucleus, plasma membrane, plastid 91.9 47.65
TraesCS2B01G604700.1 Wheat nucleus 91.43 47.64
KRH05193 Soybean plastid 28.57 40.82
Os04t0683900-01 Rice nucleus 80.48 40.33
Zm00001d026652_P001 Maize plastid 75.71 40.05
KXG27470 Sorghum nucleus 77.62 39.0
Zm00001d001784_P002 Maize nucleus 76.19 36.78
GSMUA_Achr1P03070_001 Banana cytosol, extracellular, nucleus 30.95 33.16
HORVU7Hr1G065300.2 Barley mitochondrion, plastid 26.19 29.1
HORVU0Hr1G015180.2 Barley cytosol, extracellular 30.48 27.12
VIT_15s0046g02930.t01 Wine grape nucleus, plastid 43.81 26.67
KRH48165 Soybean nucleus 42.86 26.47
KRH65066 Soybean nucleus 42.38 26.18
KRH40471 Soybean nucleus 42.38 26.1
HORVU2Hr1G105800.13 Barley cytosol, vacuole 37.62 25.73
KRH00715 Soybean nucleus 41.43 25.44
GSMUA_Achr5P20630_001 Banana nucleus, plasma membrane, plastid 40.0 25.23
Solyc08g080960.2.1 Tomato nucleus 40.0 25.15
VIT_02s0025g03580.t01 Wine grape nucleus 41.43 25.14
Solyc08g008030.2.1 Tomato nucleus 40.48 24.57
PGSC0003DMT400014926 Potato plastid 40.0 24.35
CDY42495 Canola nucleus 39.05 24.26
GSMUA_Achr8P11400_001 Banana nucleus 39.05 23.7
Solyc01g094460.2.1 Tomato nucleus 38.1 23.6
CDX89109 Canola nucleus 37.62 23.58
CDY37070 Canola nucleus 38.1 23.46
Bra039309.1-P Field mustard nucleus 38.1 23.46
Bra014444.1-P Field mustard nucleus 37.14 23.42
PGSC0003DMT400000467 Potato nucleus 37.62 23.3
KRH27929 Soybean nucleus 39.05 23.3
AT2G45850.1 Thale cress nucleus 38.57 23.28
AT3G61310.1 Thale cress nucleus, plastid 39.05 23.16
CDY48928 Canola nucleus 37.62 22.97
CDY51561 Canola nucleus 37.14 22.94
CDY27354 Canola nucleus 38.1 22.92
Bra007595.1-P Field mustard nucleus 37.14 22.87
Bra025511.1-P Field mustard nucleus 30.0 22.74
GSMUA_Achr4P30000_001 Banana nucleus 35.24 22.7
KRH77536 Soybean nucleus 38.57 22.69
CDX71746 Canola nucleus 37.14 22.67
GSMUA_Achr11P... Banana nucleus 40.48 22.67
GSMUA_Achr11P... Banana nucleus 39.52 22.37
CDY58791 Canola nucleus 34.76 22.26
PGSC0003DMT400031843 Potato plastid 40.48 22.14
KRH59866 Soybean nucleus 36.19 21.59
HORVU7Hr1G027950.1 Barley extracellular, mitochondrion, plasma membrane 24.29 21.52
HORVU7Hr1G122340.3 Barley nucleus 34.76 20.92
CDY25500 Canola nucleus 36.67 20.81
KRH41165 Soybean nucleus 34.76 20.74
CDY45364 Canola nucleus 36.19 20.71
CDY64088 Canola nucleus, plasma membrane, plastid 35.24 20.44
AT1G63470.1 Thale cress nucleus 36.67 20.37
Bra027801.1-P Field mustard nucleus 36.19 20.27
Bra027642.1-P Field mustard nucleus 36.67 20.21
HORVU5Hr1G041290.4 Barley cytosol, nucleus, peroxisome 35.71 20.11
Bra003446.1-P Field mustard nucleus 32.38 20.06
CDY34355 Canola nucleus 35.71 19.84
HORVU7Hr1G051150.4 Barley nucleus 33.81 19.35
HORVU7Hr1G075040.1 Barley plastid 35.24 18.83
HORVU5Hr1G073550.1 Barley nucleus, peroxisome, plastid 34.76 18.62
AT1G63480.1 Thale cress nucleus 31.9 18.56
HORVU1Hr1G049980.12 Barley nucleus 36.67 16.59
CDY39751 Canola nucleus 30.0 16.49
CDY46385 Canola nucleus 29.52 16.23
HORVU7Hr1G028110.15 Barley plasma membrane 24.29 13.75
Protein Annotations
EnsemblPlants:HORVU2Hr1G123730.3EnsemblPlantsGene:HORVU2Hr1G123730Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500
PANTHER:PTHR31500:SF19PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856UniParc:UPI000B463F5B
UniProt:A0A287JRR5MapMan:35.1::::
Description
No Description!
Coordinates
chrchr2H:+:756684235..756694866
Molecular Weight (calculated)
21378.0 Da
IEP (calculated)
7.601
GRAVY (calculated)
-0.103
Length
210 amino acids
Sequence
(BLAST)
001: MSKHCFLDGN AFPGSAGTSF TPHIITASPS EDVAGKIAAF ASQSPRAVCV LSAMGSVSRA VLRHPADHPP SYNNPSIYEG LYEILSLSGS YNLNEGQQNQ
101: TDGISVTLCS PERHVIGGVL GGALVAASTV QVVLGTFVQG GSKSKSKKAV KPPAAFGPES LAGAGPDVAS PSSGHNQNLT PPSIVTTGGW PSSGIFDTRS
201: SNIDINSSRG
Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.