Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G123730.3 | |
| HORVU3Hr1G087700.1 | |
| HORVU7Hr1G122340.3 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 85.71 | 52.77 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 52.91 | 52.63 |
| OQU82226 | Sorghum | plastid | 75.13 | 40.92 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 84.13 | 38.59 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 84.13 | 38.59 |
| TraesCS2A01G449500.1 | Wheat | plastid | 83.07 | 38.29 |
| Os04t0589900-01 | Rice | nucleus | 76.72 | 38.26 |
| Solyc04g053090.1.1 | Tomato | plastid | 31.75 | 35.5 |
| Zm00001d026036_P001 | Maize | nucleus | 73.55 | 34.58 |
| Solyc04g053100.1.1 | Tomato | plastid | 29.63 | 33.73 |
| HORVU0Hr1G015180.2 | Barley | cytosol, extracellular | 37.57 | 30.08 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 53.44 | 28.69 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 50.79 | 26.89 |
| PGSC0003DMT400045147 | Potato | plastid | 46.03 | 26.36 |
| HORVU2Hr1G123730.3 | Barley | plastid | 29.1 | 26.19 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 48.68 | 26.06 |
| HORVU1Hr1G049980.12 | Barley | nucleus | 58.2 | 23.71 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 43.39 | 22.34 |
| PGSC0003DMT400052826 | Potato | nucleus | 41.8 | 21.94 |
| CDY01503 | Canola | cytosol | 29.63 | 21.62 |
| KRH58200 | Soybean | nucleus | 40.74 | 21.27 |
| Solyc08g077030.2.1 | Tomato | nucleus | 45.5 | 21.03 |
| HORVU5Hr1G073550.1 | Barley | nucleus, peroxisome, plastid | 40.21 | 19.39 |
| KRH04337 | Soybean | nucleus | 36.51 | 19.38 |
| CDY01506 | Canola | nucleus | 30.69 | 19.27 |
| KRH28286 | Soybean | plastid | 34.39 | 19.17 |
| CDY41027 | Canola | cytosol | 26.98 | 19.17 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 23.81 | 18.99 |
| KRH77206 | Soybean | nucleus | 33.86 | 18.93 |
| AT5G46640.1 | Thale cress | nucleus | 38.62 | 18.91 |
| CDY68252 | Canola | nucleus | 29.63 | 18.86 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 34.39 | 18.62 |
| CDY26694 | Canola | cytosol, plastid | 25.4 | 18.32 |
| HORVU5Hr1G041290.4 | Barley | cytosol, nucleus, peroxisome | 35.98 | 18.23 |
| HORVU7Hr1G075040.1 | Barley | plastid | 37.57 | 18.07 |
| Bra021027.1-P | Field mustard | nucleus | 39.15 | 18.05 |
| Bra025718.1-P | Field mustard | nucleus, plastid | 28.57 | 17.76 |
| CDX78814 | Canola | nucleus | 38.1 | 17.69 |
| Bra025716.1-P | Field mustard | nucleus | 24.87 | 17.47 |
| CDY26693 | Canola | plastid | 24.87 | 17.41 |
| CDY26691 | Canola | cytosol, plastid | 28.57 | 17.36 |
| Solyc08g006950.2.1 | Tomato | nucleus | 35.45 | 17.14 |
| CDX76549 | Canola | nucleus | 39.15 | 16.82 |
| CDY08882 | Canola | nucleus | 38.62 | 16.78 |
| CDY44500 | Canola | nucleus | 37.04 | 16.67 |
| CDY41028 | Canola | nucleus, plastid | 21.69 | 16.53 |
| Bra013270.1-P | Field mustard | nucleus | 37.04 | 16.43 |
| CDY03203 | Canola | nucleus | 30.69 | 16.2 |
| AT4G17950.1 | Thale cress | nucleus | 37.57 | 16.17 |
| Bra025717.1-P | Field mustard | nucleus | 25.93 | 16.17 |
| CDY26692 | Canola | nucleus | 25.93 | 16.17 |
| Bra017536.1-P | Field mustard | nucleus | 30.16 | 16.15 |
| CDY35172 | Canola | nucleus | 30.16 | 16.15 |
| HORVU7Hr1G028110.15 | Barley | plasma membrane | 25.4 | 12.94 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G065300.2 | EnsemblPlantsGene:HORVU7Hr1G065300 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF25 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000B47B5AD |
| UniProt:A0A287WQI4 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:324894654..324895671
Molecular Weight (calculated)
19658.0 Da
IEP (calculated)
8.881
GRAVY (calculated)
-0.290
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSQQGSRT TCIISANGAL CIATLRQPTT SSGIVTYEGH FGILSLSGSF LLAEDGDTRS RTSGLSVSLA RSDGRVVGGC VAGMLMAATH VQVVVGSFIA
101: KGNRKPKEEQ PKREPTSVPM QTASGFGAVA SSDHSDDPGS PIGPNGNAFN NVGHPSHASY APVGWSVSGN QGRYDPDMKV VSWSSQKQR
101: KGNRKPKEEQ PKREPTSVPM QTASGFGAVA SSDHSDDPGS PIGPNGNAFN NVGHPSHASY APVGWSVSGN QGRYDPDMKV VSWSSQKQR
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.