Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82226 | Sorghum | plastid | 78.11 | 90.49 |
| Os04t0589900-01 | Rice | nucleus | 76.37 | 81.0 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 59.45 | 77.85 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 34.58 | 73.55 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 74.38 | 72.57 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 74.38 | 72.57 |
| TraesCS2A01G449500.1 | Wheat | plastid | 73.63 | 72.2 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 29.85 | 63.16 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 45.52 | 51.99 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 44.03 | 49.58 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 41.79 | 47.59 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 49.25 | 46.15 |
| Solyc04g053090.1.1 | Tomato | plastid | 19.4 | 46.15 |
| Zm00001d030053_P003 | Maize | plastid | 47.51 | 45.8 |
| PGSC0003DMT400045147 | Potato | plastid | 36.82 | 44.85 |
| Zm00001d052901_P002 | Maize | nucleus | 40.8 | 44.44 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 35.32 | 42.39 |
| Solyc04g053100.1.1 | Tomato | plastid | 17.41 | 42.17 |
| KRH58200 | Soybean | nucleus | 37.31 | 41.44 |
| KRH04337 | Soybean | nucleus | 36.07 | 40.73 |
| CDY01503 | Canola | cytosol | 25.37 | 39.38 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 40.3 | 39.32 |
| Solyc08g077030.2.1 | Tomato | nucleus | 39.55 | 38.88 |
| PGSC0003DMT400052826 | Potato | nucleus | 34.08 | 38.06 |
| KRH28286 | Soybean | plastid | 32.09 | 38.05 |
| Zm00001d006034_P003 | Maize | nucleus | 40.3 | 37.67 |
| KRH77206 | Soybean | nucleus | 31.59 | 37.57 |
| AT5G46640.1 | Thale cress | nucleus | 36.07 | 37.56 |
| Zm00001d018515_P002 | Maize | nucleus | 36.07 | 37.37 |
| Zm00001d037425_P001 | Maize | nucleus | 32.59 | 36.69 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 31.84 | 36.26 |
| Zm00001d004924_P001 | Maize | cytosol | 31.34 | 35.2 |
| CDY41027 | Canola | cytosol | 23.13 | 34.96 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 34.58 | 34.75 |
| Zm00001d015090_P001 | Maize | extracellular | 22.89 | 34.72 |
| CDY41028 | Canola | nucleus, plastid | 21.14 | 34.27 |
| CDY03203 | Canola | nucleus | 30.35 | 34.08 |
| Bra025716.1-P | Field mustard | nucleus | 22.64 | 33.83 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 32.84 | 33.76 |
| Bra017536.1-P | Field mustard | nucleus | 29.6 | 33.71 |
| CDY35172 | Canola | nucleus | 29.6 | 33.71 |
| CDX78814 | Canola | nucleus | 34.08 | 33.66 |
| CDY68252 | Canola | nucleus | 24.63 | 33.33 |
| CDY26693 | Canola | plastid | 22.39 | 33.33 |
| Bra021027.1-P | Field mustard | nucleus | 33.83 | 33.17 |
| CDY44500 | Canola | nucleus | 34.58 | 33.1 |
| CDY01506 | Canola | nucleus | 24.63 | 32.89 |
| CDY26694 | Canola | cytosol, plastid | 21.39 | 32.82 |
| Solyc08g006950.2.1 | Tomato | nucleus | 31.34 | 32.23 |
| CDY08882 | Canola | nucleus | 34.83 | 32.18 |
| CDY26692 | Canola | nucleus | 24.13 | 32.01 |
| Bra025717.1-P | Field mustard | nucleus | 24.13 | 32.01 |
| AT4G17950.1 | Thale cress | nucleus | 34.83 | 31.89 |
| CDX76549 | Canola | nucleus | 34.83 | 31.82 |
| Bra025718.1-P | Field mustard | nucleus, plastid | 23.63 | 31.25 |
| CDY26691 | Canola | cytosol, plastid | 24.13 | 31.19 |
| Bra013270.1-P | Field mustard | nucleus | 32.34 | 30.52 |
| Zm00001d026652_P001 | Maize | plastid | 28.61 | 28.97 |
| Zm00001d001784_P002 | Maize | nucleus | 27.86 | 25.75 |
| Zm00001d020950_P001 | Maize | cytosol | 1.24 | 4.27 |
Protein Annotations
| EMBL:BT054462 | EMBL:EU965271 | EnsemblPlants:Zm00001d026036_P001 | EnsemblPlants:Zm00001d026036_T001 | EnsemblPlantsGene:Zm00001d026036 | EntrezGene:100283605 |
| Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF25 | PFAM:PF03479 |
| PFscan:PS51742 | ProteinID:AQK45363.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000182E1A0 | UniProt:B6TJV6 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT-hook motif nuclear-localized protein 13
Coordinates
chr10:+:136545479..136549919
Molecular Weight (calculated)
40480.8 Da
IEP (calculated)
8.476
GRAVY (calculated)
-0.311
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVRDLHQQP QQQQAPPRVG SPPQAGAGGV MMQHAAAFGA APPPSGLPQA SAANVMHGMS LAFNPMASPD ASSPISSMKI VDMPLGSMYR PDSGATGLQQ
101: QQPGSGGVGA SGGAIVAVSG GDLVKKKRGR PRKYGPDGSI GLGLKTAAAG VTEATGAQSG GGGSTPNPDG KRRGRPPGSG KKKQLDALGS SGTSFTPHII
201: TVKPNEDVAS KIMAFSQQGP RTTCIISANG ALCTATLRQP ATSGGIVTYE GHFDILSLSG SFLLAEDGDT RSRTGGLSVA LAGSDGRIVG GCVAGMLMAA
301: TPVQVVVGSF IAEAKKPKEE QPKREPTSVP PHTAVFGAAS TASPPSDGTS SEHSDDPGSP MGPNGSAFTS AGLPLHSTYA AVGWSLSEDQ SRYDPDLKMM
401: TD
101: QQPGSGGVGA SGGAIVAVSG GDLVKKKRGR PRKYGPDGSI GLGLKTAAAG VTEATGAQSG GGGSTPNPDG KRRGRPPGSG KKKQLDALGS SGTSFTPHII
201: TVKPNEDVAS KIMAFSQQGP RTTCIISANG ALCTATLRQP ATSGGIVTYE GHFDILSLSG SFLLAEDGDT RSRTGGLSVA LAGSDGRIVG GCVAGMLMAA
301: TPVQVVVGSF IAEAKKPKEE QPKREPTSVP PHTAVFGAAS TASPPSDGTS SEHSDDPGSP MGPNGSAFTS AGLPLHSTYA AVGWSLSEDQ SRYDPDLKMM
401: TD
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.