Factsheet for Zm00001d031481_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, plasma membrane

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25625	Sorghum	nucleus	77.91	86.06
Zm00001d052901_P002	Maize	nucleus	72.09	80.49
Os08t0512400-02	Rice	nucleus	63.84	74.29
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	65.29	72.7
TraesCS7A01G248500.1	Wheat	nucleus	64.56	71.89
HORVU7Hr1G051150.4	Barley	nucleus	63.59	71.39
TraesCS7B01G143000.1	Wheat	nucleus	62.38	71.19
CDX84679	Canola	nucleus	38.59	60.69
Bra022946.1-P	Field mustard	nucleus	38.35	60.31
CDX79537	Canola	mitochondrion, nucleus, plastid	38.35	60.31
Zm00001d020951_P002	Maize	cytosol, nucleus, peroxisome, plastid	49.03	60.3
GSMUA_Achr6P03420_001	Banana	nucleus	51.46	58.89
GSMUA_Achr3P03710_001	Banana	nucleus	51.7	58.36
VIT_18s0122g00700.t01	Wine grape	nucleus	48.06	56.09
Zm00001d006034_P003	Maize	nucleus	57.04	54.65
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	53.16	53.81
AT2G33620.2	Thale cress	nucleus	44.42	52.14
PGSC0003DMT400075370	Potato	nucleus	45.15	51.96
Bra021865.1-P	Field mustard	nucleus	43.2	50.86
Solyc12g094710.1.1	Tomato	nucleus	43.93	50.7
CDY37704	Canola	nucleus	43.45	47.73
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	48.06	47.03
KRH60876	Soybean	nucleus	40.05	46.22
KRH51558	Soybean	nucleus	39.32	45.63
CDY23720	Canola	extracellular, plasma membrane, vacuole	43.69	45.23
Zm00001d037425_P001	Maize	nucleus	37.86	43.7
Zm00001d030053_P003	Maize	plastid	41.26	40.77
Zm00001d026036_P001	Maize	nucleus	39.32	40.3
Zm00001d047042_P004	Maize	cytosol, nucleus, plasma membrane	40.29	38.69
Zm00001d015090_P001	Maize	extracellular	22.57	35.09
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	29.37	34.28
Zm00001d004924_P001	Maize	cytosol	28.64	32.96
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	31.07	32.74
Zm00001d018515_P002	Maize	nucleus	30.83	32.73
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	14.32	30.73
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	29.61	30.5
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	23.54	29.75
Zm00001d026652_P001	Maize	plastid	25.97	26.95
Zm00001d001784_P002	Maize	nucleus	26.46	25.06
Zm00001d020950_P001	Maize	cytosol	0.49	1.71

Protein Annotations

EnsemblPlants:Zm00001d031481_P001	EnsemblPlants:Zm00001d031481_T001	EnsemblPlantsGene:Zm00001d031481	Gene3D:3.30.1330.80	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:AT_hook_DNA-bd_motif	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF13	PFAM:PF03479	PFscan:PS51742	ProteinID:ONM02937.1	SEG:seg	SMART:SM00384
SUPFAM:SSF117856	UniParc:UPI0008435DA6	UniProt:A0A1D6KJ12	MapMan:35.1	:	:

Description

AT-hook motif nuclear-localized protein 10

Coordinates

chr1:-:191521128..191523748

Molecular Weight (calculated)

41779.2 Da

IEP (calculated)

10.965

GRAVY (calculated)

-0.148

Length

412 amino acids

Sequence
(BLAST)

001: MEVRSEQGLM AGRDLFGMPK SPPAPVSGPP ASAAMQSVRM AYTSDGTAVF APMRSSAATP SYQPQGAAHG ASMSAATIIG GNGAAAAPSM GEPVPKKKRG
101: RPRKYGPDGS MALALVPVSA ATGSPTTGQG SSGPFSPAGS NLTNSLLVAS PDGFKKRGRP KGSTNKPRMD AAGKISTAII YTDFKVLDRQ ELDLHLMLSQ
201: FKLGSVKVFS SVPVVTVILL LKANFKDVSS KIMSFSQHGP RAVCVLSANG AISNVTLRQT ATSGGTVTYE GRFEILSLSG SFLLVEDGGQ RSRTGGLSVS
301: LAGPDGRVLG GGVAGLLVAA SPVQIVLGSF NSGGKKEAKK HAPSGPTPAP LKVAPPTTTR MGPNSSSPPS RGGTLSESSG GAGSPPPPLH QGMAASSSND
401: QPPFLSSIMP WK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.