Factsheet for Bra022946.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84679	Canola	nucleus	98.47	98.47
CDX79537	Canola	mitochondrion, nucleus, plastid	97.33	97.33
Bra021865.1-P	Field mustard	nucleus	82.06	61.43
AT2G33620.2	Thale cress	nucleus	77.86	58.12
VIT_18s0122g00700.t01	Wine grape	nucleus	64.89	48.16
GSMUA_Achr7P20540_001	Banana	nucleus	50.38	45.05
Os08t0512400-02	Rice	nucleus	60.31	44.63
GSMUA_Achr6P03420_001	Banana	nucleus	61.07	44.44
Os09t0491708-01	Rice	nucleus	59.92	43.73
KXG25625	Sorghum	nucleus	61.45	43.16
GSMUA_Achr3P03710_001	Banana	nucleus	59.92	43.01
TraesCS7B01G143000.1	Wheat	nucleus	58.02	42.11
HORVU7Hr1G051150.4	Barley	nucleus	58.02	41.42
PGSC0003DMT400075370	Potato	nucleus	56.49	41.34
TraesCS7A01G248500.1	Wheat	nucleus	58.02	41.08
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	58.02	41.08
OQU89696	Sorghum	nucleus	59.16	40.68
Solyc12g094710.1.1	Tomato	nucleus	55.34	40.62
Zm00001d052901_P002	Maize	nucleus	56.49	40.11
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	62.21	40.05
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	60.31	38.35
KRH51558	Soybean	nucleus	51.15	37.75
KRH60876	Soybean	nucleus	51.15	37.53
Zm00001d037425_P001	Maize	nucleus	50.0	36.69
OQU76344	Sorghum	nucleus	49.62	35.91
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	56.87	35.39
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	52.29	34.95
Zm00001d006034_P003	Maize	nucleus	57.25	34.88
Bra033121.1-P	Field mustard	nucleus	38.93	32.9
Bra013646.1-P	Field mustard	nucleus	37.4	32.13
Bra025511.1-P	Field mustard	nucleus	33.97	32.13
Os06t0326000-01	Rice	nucleus	46.18	32.01
Bra037321.1-P	Field mustard	nucleus	38.17	31.65
Bra019359.1-P	Field mustard	nucleus	38.55	30.7
Bra017536.1-P	Field mustard	nucleus	40.46	30.03
Bra039309.1-P	Field mustard	nucleus	38.93	29.91
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	21.76	29.69
Bra021027.1-P	Field mustard	nucleus	46.18	29.51
Bra014444.1-P	Field mustard	nucleus	37.02	29.13
Bra027801.1-P	Field mustard	nucleus	41.6	29.07
Bra007595.1-P	Field mustard	nucleus	37.79	29.03
Bra027642.1-P	Field mustard	nucleus	41.6	28.61
Bra025716.1-P	Field mustard	nucleus	28.24	27.51
Bra025717.1-P	Field mustard	nucleus	31.68	27.39
Bra013886.1-P	Field mustard	nucleus	39.69	27.3
Bra019174.1-P	Field mustard	nucleus	40.84	27.02
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	33.59	26.99
Bra029164.1-P	Field mustard	nucleus	42.37	26.18
Bra025718.1-P	Field mustard	nucleus, plastid	30.15	25.99
TraesCS7A01G134300.1	Wheat	cytosol	19.47	25.89
Bra028265.1-P	Field mustard	nucleus	42.37	25.87
Bra013270.1-P	Field mustard	nucleus	41.98	25.82
Bra003446.1-P	Field mustard	nucleus	32.82	25.37
Bra022555.1-P	Field mustard	nucleus	40.46	25.3
TraesCS7B01G035400.1	Wheat	cytosol	19.08	25.0
Bra035899.1-P	Field mustard	nucleus	37.4	25.0
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	22.14	24.47
Bra020612.1-P	Field mustard	nucleus	32.82	24.43
Bra010070.1-P	Field mustard	nucleus	37.02	24.07
Bra040133.1-P	Field mustard	nucleus	35.11	24.02
TraesCS7B01G035900.1	Wheat	nucleus	33.21	23.97
Bra009999.1-P	Field mustard	nucleus	33.97	23.92
TraesCS7D01G134100.1	Wheat	nucleus	32.82	23.76
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	36.26	23.69
TraesCS7D01G133700.1	Wheat	cytosol	19.85	22.61
HORVU7Hr1G028110.15	Barley	plasma membrane	29.77	21.02

Protein Annotations

EnsemblPlants:Bra022946.1	EnsemblPlants:Bra022946.1-P	EnsemblPlantsGene:Bra022946	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF0	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI000253FD36	UniProt:M4E2E6	MapMan:35.1	:	:	:

Description

AT2G33620 (E=5e-082) | DNA-binding family protein / AT-hook protein 1 (AHP1)

Coordinates

chrA03:+:7895972..7897496

Molecular Weight (calculated)

27047.3 Da

IEP (calculated)

11.050

GRAVY (calculated)

-0.309

Length

262 amino acids

Sequence
(BLAST)

001: MNMPVEMTGS EPVKKRRGRP RKYGPELGLV PGAPSFTQAQ TSGGGSGEGG SSAQKRMRGR PRGSSNRKKL QALGSTGVGF VPHVLTVGTG EDVSSKIMAF
101: SQNGPRTVCV LSANGSISNV TLRQFATSGG TVTYEGRFEI LSLSGSFLLV ENNGHRSRTG GLSVTLSAPD GHVLGGCVAG LLIAASPVQI VVGSFIPEGQ
201: KELASPTLLP RVAPSHVLMN PSSPQSRGAM SESSIGGHGS PLHQSNTGGP YNNTNNPSMP WK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.