Factsheet for Bra037321.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07238	Canola	nucleus	100.0	100.0
CDY07239	Canola	plasma membrane	66.14	90.48
AT4G00200.2	Thale cress	nucleus	75.95	75.47
KRH00569	Soybean	cytosol, peroxisome, plastid	53.8	50.3
KRH76268	Soybean	cytosol, nucleus, plastid	54.43	49.71
KRH40594	Soybean	nucleus	52.85	49.55
KRH65263	Soybean	cytosol, nucleus, plastid	54.11	49.42
VIT_15s0048g00870.t01	Wine grape	nucleus	50.95	48.2
Bra013646.1-P	Field mustard	nucleus	44.94	46.56
Bra019359.1-P	Field mustard	nucleus	47.78	45.9
PGSC0003DMT400033227	Potato	cytosol, nucleus, peroxisome	47.47	45.18
Solyc01g091370.2.1	Tomato	nucleus	45.25	44.97
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	33.23	44.49
Zm00001d015090_P001	Maize	extracellular	34.49	41.13
Bra033121.1-P	Field mustard	nucleus	40.19	40.97
Bra022946.1-P	Field mustard	nucleus	31.65	38.17
KXG29351	Sorghum	plastid	40.82	34.4
TraesCS6B01G114000.1	Wheat	cytosol, nucleus, peroxisome	42.41	34.27
TraesCS6A01G083100.1	Wheat	cytosol, nucleus, peroxisome	42.72	34.09
TraesCS6D01G076900.1	Wheat	nucleus	42.72	34.09
Os02t0125200-00	Rice	mitochondrion	37.66	32.43
Bra035899.1-P	Field mustard	nucleus	39.56	31.89
Bra013886.1-P	Field mustard	nucleus	38.29	31.76
Bra029164.1-P	Field mustard	nucleus	42.41	31.6
Bra019174.1-P	Field mustard	nucleus	39.56	31.57
Bra025511.1-P	Field mustard	nucleus	27.53	31.41
Bra010070.1-P	Field mustard	nucleus	39.56	31.02
Bra039309.1-P	Field mustard	nucleus	32.59	30.21
Bra028265.1-P	Field mustard	nucleus	40.82	30.07
Bra021865.1-P	Field mustard	nucleus	33.23	30.0
Bra007595.1-P	Field mustard	nucleus	31.65	29.33
Bra025716.1-P	Field mustard	nucleus	24.68	29.0
Bra014444.1-P	Field mustard	nucleus	30.38	28.83
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	36.08	28.43
Bra022555.1-P	Field mustard	nucleus	37.66	28.4
Bra027642.1-P	Field mustard	nucleus	33.54	27.82
Bra025717.1-P	Field mustard	nucleus	25.95	27.06
Bra027801.1-P	Field mustard	nucleus	31.65	26.67
Bra025718.1-P	Field mustard	nucleus, plastid	25.0	25.99
Bra021027.1-P	Field mustard	nucleus	33.23	25.61
Bra017536.1-P	Field mustard	nucleus	28.16	25.21
Bra003446.1-P	Field mustard	nucleus	26.9	25.07
Bra020612.1-P	Field mustard	nucleus	26.9	24.15
Bra013270.1-P	Field mustard	nucleus	31.65	23.47
Bra009999.1-P	Field mustard	nucleus	26.9	22.85
Bra040133.1-P	Field mustard	nucleus	27.22	22.45

Protein Annotations

EnsemblPlants:Bra037321.1	EnsemblPlants:Bra037321.1-P	EnsemblPlantsGene:Bra037321	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF15	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI0002541B0F	UniProt:M4F8A9	MapMan:35.1	:	:	:

Description

AT4G00200 (E=5e-087) | DNA binding

Coordinates

chrA09:+:1076739..1078309

Molecular Weight (calculated)

33476.9 Da

IEP (calculated)

9.578

GRAVY (calculated)

-0.322

Length

316 amino acids

Sequence
(BLAST)

001: METSDKISFG VTVIGAEGPS TFHMAPRPSD EIPNQFLGSS LAPMEAPMAS ASSGDALGKK KRGRPRKYEA NGALLPMQIC SSASLVKKKR GRGKFNGLDM
101: KMHKRMGFHT SGERFGVGFG SNFTPHIITV NAGEDINMRV ISFSQQGPKA ICILSANGVI SNVTLRHPDS CGGTLTYEGR FEILSLSGTF METENIGSRG
201: RSGGMSVSLA GPDGRVVGGG VAGLLIAATP IQVVVGSFVT GDQQEHKKPL RKQRVDHTTS STVMALPPPP PPSVFSSSNP EREQPLPSSL DISSWNNGED
301: NLRSLDTDIN VSSPAH

Best Arabidopsis Sequence Match ( AT4G00200.2 )
(BLAST)

001: METSDRISPG GGIGAEVPSA YHMAPRPSDS PANQFMGLSL PPMEAPMPSS GEASGKKRRG RPRKYEANGA PLPSSSVPLV KKRVRGKLNG FDMKKMHKTI
101: GFHSSGERFG VGGGVGGGVG SNFTPHVITV NTGEDITMRI ISFSQQGPRA ICILSANGVI SNVTLRQPDS CGGTLTYEGR FEILSLSGSF METENQGSKG
201: RSGGMSVSLA GPDGRVVGGG VAGLLIAATP IQVVVGSFIT SDQQDHQKPR KQRVEHAPAA VMSVPPPPSP PPPAASVFSP TNPDREQPPS SFGISSWTNG
301: QDMPRNSATD INISLPVD

Arabidopsis Description

AHL7AT-hook motif nuclear-localized protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3E0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.