Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037321.1-P | Field mustard | nucleus | 90.48 | 66.14 |
| CDY07238 | Canola | nucleus | 90.48 | 66.14 |
| AT4G00200.2 | Thale cress | nucleus | 72.29 | 52.52 |
| HORVU0Hr1G015180.2 | Barley | cytosol, extracellular | 45.45 | 44.49 |
| Zm00001d015090_P001 | Maize | extracellular | 44.59 | 38.87 |
| Solyc01g091370.2.1 | Tomato | nucleus | 50.22 | 36.48 |
| KRH00569 | Soybean | cytosol, peroxisome, plastid | 52.38 | 35.8 |
| KRH40594 | Soybean | nucleus | 51.95 | 35.61 |
| KRH65263 | Soybean | cytosol, nucleus, plastid | 53.25 | 35.55 |
| KRH76268 | Soybean | cytosol, nucleus, plastid | 53.25 | 35.55 |
| VIT_15s0048g00870.t01 | Wine grape | nucleus | 50.65 | 35.03 |
| PGSC0003DMT400033227 | Potato | cytosol, nucleus, peroxisome | 50.22 | 34.94 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 49.35 | 34.65 |
| CDX98767 | Canola | nucleus | 49.35 | 34.65 |
| CDY41291 | Canola | nucleus | 45.02 | 34.1 |
| CDX84679 | Canola | nucleus | 36.36 | 32.06 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 36.36 | 32.06 |
| CDY47428 | Canola | nucleus | 40.69 | 30.42 |
| Os02t0125200-00 | Rice | mitochondrion | 47.19 | 29.7 |
| CDY04392 | Canola | nucleus | 33.33 | 28.73 |
| KXG29351 | Sorghum | plastid | 45.45 | 28.0 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 46.32 | 27.37 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 46.32 | 27.02 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 45.89 | 26.77 |
| CDX82971 | Canola | plastid | 24.68 | 26.51 |
| CDY26694 | Canola | cytosol, plastid | 29.44 | 25.95 |
| CDY41027 | Canola | cytosol | 29.87 | 25.94 |
| CDX94457 | Canola | nucleus | 42.42 | 25.93 |
| CDX87241 | Canola | nucleus | 42.42 | 25.06 |
| CDY16785 | Canola | nucleus | 42.42 | 25.0 |
| CDX89422 | Canola | nucleus | 41.56 | 25.0 |
| CDY01503 | Canola | cytosol | 27.71 | 24.71 |
| CDX86910 | Canola | nucleus | 42.42 | 24.56 |
| CDX92693 | Canola | nucleus | 41.99 | 24.49 |
| CDY26693 | Canola | plastid | 28.57 | 24.44 |
| CDY49703 | Canola | nucleus | 41.99 | 24.31 |
| CDY00271 | Canola | nucleus | 41.99 | 24.07 |
| CDY38874 | Canola | nucleus | 43.72 | 23.88 |
| CDY32624 | Canola | nucleus | 43.29 | 23.58 |
| CDY01506 | Canola | nucleus | 30.3 | 23.26 |
| CDY37070 | Canola | nucleus | 34.2 | 23.17 |
| CDY37704 | Canola | nucleus | 37.23 | 22.93 |
| CDY26691 | Canola | cytosol, plastid | 30.74 | 22.83 |
| CDY30710 | Canola | nucleus | 39.39 | 22.69 |
| CDY27354 | Canola | nucleus | 34.2 | 22.64 |
| CDY41028 | Canola | nucleus, plastid | 24.24 | 22.58 |
| CDY68252 | Canola | nucleus | 29.0 | 22.56 |
| CDY00488 | Canola | nucleus | 41.56 | 22.38 |
| CDY25500 | Canola | nucleus | 35.5 | 22.16 |
| CDY26692 | Canola | nucleus | 29.0 | 22.11 |
| CDY48928 | Canola | nucleus | 32.9 | 22.09 |
| CDX71746 | Canola | nucleus | 32.9 | 22.09 |
| CDX89109 | Canola | nucleus | 32.03 | 22.09 |
| CDY42495 | Canola | nucleus | 32.03 | 21.89 |
| CDY34355 | Canola | nucleus | 35.5 | 21.69 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 36.8 | 21.36 |
| CDX99902 | Canola | nucleus | 40.26 | 21.18 |
| CDX91598 | Canola | nucleus | 38.1 | 21.0 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 32.9 | 20.99 |
| CDY45364 | Canola | nucleus | 33.33 | 20.98 |
| CDY65097 | Canola | nucleus | 37.23 | 20.53 |
| CDY58791 | Canola | nucleus | 28.57 | 20.12 |
| CDY51561 | Canola | nucleus | 29.44 | 20.0 |
| CDX78814 | Canola | nucleus | 35.06 | 19.9 |
| CDY44500 | Canola | nucleus | 35.06 | 19.29 |
| CDY52506 | Canola | nucleus | 28.57 | 18.91 |
| CDY46385 | Canola | nucleus | 31.17 | 18.85 |
| CDY08882 | Canola | nucleus | 35.06 | 18.62 |
| CDY39751 | Canola | nucleus | 30.74 | 18.59 |
| CDY05594 | Canola | nucleus | 28.57 | 18.54 |
| CDY03203 | Canola | nucleus | 28.57 | 18.44 |
| CDX76549 | Canola | nucleus | 35.06 | 18.41 |
| CDY65362 | Canola | nucleus | 29.0 | 18.01 |
| CDY52477 | Canola | nucleus | 28.57 | 17.93 |
| CDY35172 | Canola | nucleus | 27.27 | 17.85 |
| CDY21122 | Canola | nucleus | 28.14 | 16.84 |
| CDY30005 | Canola | nucleus | 27.71 | 16.8 |
| CDY13231 | Canola | nucleus | 28.57 | 16.1 |
Protein Annotations
| EnsemblPlants:CDY07239 | EnsemblPlantsGene:GSBRNA2T00123602001 | Gene3D:3.30.1330.80 | GO:A0A078F2R6 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF15 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY07239 | ProteinID:CDY07239.1 |
| SEG:seg | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0004EEC632 | MapMan:35.1 | : |
Description
BnaCnng02540D
Coordinates
chrLK031975:+:993853..996502
Molecular Weight (calculated)
24533.5 Da
IEP (calculated)
5.994
GRAVY (calculated)
0.106
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLVMNMLIA YITFIFCGLV IIIVFAGERF GVGFGSNFTP HIITVNAGED INMRVISFSQ QGPKAICILS ANGVISNVTL RHPDSCGGTL TYEGRFEILS
101: LSGTFMETEN IGSRGRSGGM SVSLAGPDGR VVGGGVAGLL IAATPIQVVV GSFVTGDQQE HKKPLRKQRV DHTTSSTVMA LPPPPPPSVF SSSNPEREQP
201: LPSSLDISSW NNGEDNLRSL DTDINVSSPA H
101: LSGTFMETEN IGSRGRSGGM SVSLAGPDGR VVGGGVAGLL IAATPIQVVV GSFVTGDQQE HKKPLRKQRV DHTTSSTVMA LPPPPPPSVF SSSNPEREQP
201: LPSSLDISSW NNGEDNLRSL DTDINVSSPA H
001: METSDRISPG GGIGAEVPSA YHMAPRPSDS PANQFMGLSL PPMEAPMPSS GEASGKKRRG RPRKYEANGA PLPSSSVPLV KKRVRGKLNG FDMKKMHKTI
101: GFHSSGERFG VGGGVGGGVG SNFTPHVITV NTGEDITMRI ISFSQQGPRA ICILSANGVI SNVTLRQPDS CGGTLTYEGR FEILSLSGSF METENQGSKG
201: RSGGMSVSLA GPDGRVVGGG VAGLLIAATP IQVVVGSFIT SDQQDHQKPR KQRVEHAPAA VMSVPPPPSP PPPAASVFSP TNPDREQPPS SFGISSWTNG
301: QDMPRNSATD INISLPVD
101: GFHSSGERFG VGGGVGGGVG SNFTPHVITV NTGEDITMRI ISFSQQGPRA ICILSANGVI SNVTLRQPDS CGGTLTYEGR FEILSLSGSF METENQGSKG
201: RSGGMSVSLA GPDGRVVGGG VAGLLIAATP IQVVVGSFIT SDQQDHQKPR KQRVEHAPAA VMSVPPPPSP PPPAASVFSP TNPDREQPPS SFGISSWTNG
301: QDMPRNSATD INISLPVD
Arabidopsis Description
AHL7AT-hook motif nuclear-localized protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3E0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.