Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013886.1-P | Field mustard | nucleus | 95.83 | 96.59 |
| CDX94457 | Canola | nucleus | 94.79 | 96.3 |
| CDX92693 | Canola | nucleus | 84.11 | 81.57 |
| CDY49703 | Canola | nucleus | 84.38 | 81.2 |
| AT4G25320.1 | Thale cress | nucleus | 81.25 | 77.23 |
| CDY38874 | Canola | nucleus | 62.5 | 56.74 |
| CDY32624 | Canola | nucleus | 62.24 | 56.37 |
| CDY00488 | Canola | nucleus | 62.76 | 56.18 |
| CDY65097 | Canola | nucleus | 58.07 | 53.22 |
| CDX91598 | Canola | nucleus | 57.55 | 52.74 |
| CDX99902 | Canola | nucleus | 59.64 | 52.16 |
| KRH34345 | Soybean | nucleus | 39.32 | 45.76 |
| KRG92455 | Soybean | nucleus | 39.06 | 45.45 |
| PGSC0003DMT400071865 | Potato | plastid | 35.68 | 44.48 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.84 | 43.59 |
| Solyc03g007150.2.1 | Tomato | nucleus | 36.72 | 43.38 |
| KRH09229 | Soybean | nucleus | 37.76 | 42.15 |
| KRH38723 | Soybean | nucleus | 37.76 | 42.15 |
| Solyc06g035430.2.1 | Tomato | nucleus | 37.5 | 41.62 |
| CDY07239 | Canola | plasma membrane | 25.0 | 41.56 |
| CDX87241 | Canola | nucleus | 41.41 | 40.66 |
| CDY00271 | Canola | nucleus | 42.19 | 40.2 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 35.16 | 40.18 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 27.34 | 40.08 |
| CDX84679 | Canola | nucleus | 27.34 | 40.08 |
| CDY16785 | Canola | nucleus | 40.89 | 40.05 |
| CDY04392 | Canola | nucleus | 27.86 | 39.93 |
| PGSC0003DMT400079651 | Potato | nucleus | 35.94 | 39.88 |
| CDX86910 | Canola | nucleus | 41.15 | 39.6 |
| CDY30710 | Canola | nucleus | 40.89 | 39.15 |
| CDY07238 | Canola | nucleus | 32.03 | 38.92 |
| CDY47428 | Canola | nucleus | 31.25 | 38.84 |
| CDX82971 | Canola | plastid | 21.61 | 38.6 |
| CDX98767 | Canola | nucleus | 33.07 | 38.6 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 33.07 | 38.6 |
| CDY41291 | Canola | nucleus | 30.21 | 38.03 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 36.46 | 36.75 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 36.46 | 36.65 |
| Os08t0118000-01 | Rice | nucleus | 34.64 | 35.75 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 35.16 | 34.62 |
| KXG24283 | Sorghum | plastid | 33.85 | 33.08 |
| TraesCS7B01G215600.1 | Wheat | plastid | 33.85 | 32.99 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 33.07 | 32.48 |
| HORVU7Hr1G075040.1 | Barley | plastid | 33.07 | 32.32 |
| TraesCS7D01G312100.1 | Wheat | plastid | 33.33 | 32.24 |
| TraesCS7A01G315100.1 | Wheat | plastid | 33.33 | 32.16 |
| CDX89109 | Canola | nucleus | 25.78 | 29.55 |
| CDY42495 | Canola | nucleus | 25.78 | 29.29 |
| CDY58791 | Canola | nucleus | 25.0 | 29.27 |
| CDY41028 | Canola | nucleus, plastid | 18.75 | 29.03 |
| CDY37070 | Canola | nucleus | 25.52 | 28.74 |
| CDY01503 | Canola | cytosol | 19.27 | 28.57 |
| CDY51561 | Canola | nucleus | 25.26 | 28.53 |
| CDY27354 | Canola | nucleus | 25.78 | 28.37 |
| CDY37704 | Canola | nucleus | 27.6 | 28.27 |
| CDX71746 | Canola | nucleus | 25.26 | 28.2 |
| CDY48928 | Canola | nucleus | 25.0 | 27.91 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 28.12 | 27.14 |
| CDY25500 | Canola | nucleus | 26.04 | 27.03 |
| CDY41027 | Canola | cytosol | 18.49 | 26.69 |
| CDY05594 | Canola | nucleus | 24.48 | 26.4 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 24.74 | 26.24 |
| CDY52506 | Canola | nucleus | 23.7 | 26.07 |
| CDY26692 | Canola | nucleus | 20.57 | 26.07 |
| CDY34355 | Canola | nucleus | 25.52 | 25.93 |
| CDY45364 | Canola | nucleus | 24.74 | 25.89 |
| CDY26694 | Canola | cytosol, plastid | 17.45 | 25.57 |
| CDY26693 | Canola | plastid | 17.97 | 25.56 |
| CDY52477 | Canola | nucleus | 24.22 | 25.27 |
| CDY68252 | Canola | nucleus | 19.53 | 25.25 |
| CDY65362 | Canola | nucleus | 24.22 | 25.0 |
| CDY26691 | Canola | cytosol, plastid | 19.79 | 24.44 |
| CDX78814 | Canola | nucleus | 25.78 | 24.32 |
| CDY03203 | Canola | nucleus | 22.4 | 24.02 |
| CDY01506 | Canola | nucleus | 18.75 | 23.92 |
| CDY30005 | Canola | nucleus | 23.7 | 23.88 |
| CDY21122 | Canola | nucleus | 23.7 | 23.58 |
| CDY08882 | Canola | nucleus | 26.56 | 23.45 |
| CDY44500 | Canola | nucleus | 25.52 | 23.33 |
| CDY35172 | Canola | nucleus | 21.35 | 23.23 |
| CDX76549 | Canola | nucleus | 26.56 | 23.18 |
| CDY46385 | Canola | nucleus | 22.92 | 23.04 |
| CDY39751 | Canola | nucleus | 22.92 | 23.04 |
| CDY13231 | Canola | nucleus | 23.44 | 21.95 |
Protein Annotations
| EnsemblPlants:CDX89422 | EnsemblPlantsGene:GSBRNA2T00149669001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX89422 | ProteinID:CDX89422.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EF19B7 | MapMan:35.1 | : | : | : |
Description
BnaA01g14710D
Coordinates
chrLK031858:-:1544403..1546470
Molecular Weight (calculated)
40764.3 Da
IEP (calculated)
4.692
GRAVY (calculated)
-0.551
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEREGTNNN TTSLNQTAAS SDAYPMDPPR PDNPNPFSAP PTTSSVGNAA PQFSLTMPAE TASSEQKKKR GRPRKYNPDG TLAVTLSPMP ISSSVPLTSG
101: LPPRKRGRGR GRSSQWLKKP EMFQFDRSPV ETSFAGVGTA ADFVGANFTP HMLTVNAGED VTMKIMTFSQ QGSRAICILS ANGLISNVTL RQTTTSGGTL
201: TYEGRFEILS LTGLFMQTDS GGTRSRAGGM SVCLAGPDGR VFGGGLAGLF LAAGPVQVMV ATFIAAQEQS HLQLAQERLQ RFGAQPPSIS FNITAEERKA
301: RFERLNNSVT VPAPTPSYPH DNTGNVVHSY YTNSVNHVKD PFSSIQGGGG GGGGEDEGEE DEGDGDELEG EDEEFGESDD EIPS
101: LPPRKRGRGR GRSSQWLKKP EMFQFDRSPV ETSFAGVGTA ADFVGANFTP HMLTVNAGED VTMKIMTFSQ QGSRAICILS ANGLISNVTL RQTTTSGGTL
201: TYEGRFEILS LTGLFMQTDS GGTRSRAGGM SVCLAGPDGR VFGGGLAGLF LAAGPVQVMV ATFIAAQEQS HLQLAQERLQ RFGAQPPSIS FNITAEERKA
301: RFERLNNSVT VPAPTPSYPH DNTGNVVHSY YTNSVNHVKD PFSSIQGGGG GGGGEDEGEE DEGDGDELEG EDEEFGESDD EIPS
001: MEEREGTNIN NNITSSFGLK QQHEAAASDG GYSMDPPPRP ENPNPFLVPP TTVPAAATVA AAVTENAATP FSLTMPTENT SAEQLKKKRG RPRKYNPDGT
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
Arabidopsis Description
AHL3AT-hook motif nuclear-localized protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.