Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05594 | Canola | nucleus | 66.83 | 76.97 |
| CDY52506 | Canola | nucleus | 62.68 | 73.64 |
| CDY52477 | Canola | nucleus | 59.02 | 65.76 |
| CDY65362 | Canola | nucleus | 59.27 | 65.32 |
| AT5G28590.1 | Thale cress | mitochondrion | 29.27 | 55.56 |
| CDY21122 | Canola | nucleus | 46.59 | 49.48 |
| CDY30005 | Canola | nucleus | 45.12 | 48.56 |
| PGSC0003DMT400073848 | Potato | nucleus | 32.68 | 40.61 |
| KRH68809 | Soybean | nucleus | 33.41 | 39.6 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 34.15 | 39.22 |
| Solyc11g006190.1.1 | Tomato | nucleus | 32.2 | 39.17 |
| KRG97062 | Soybean | nucleus | 33.41 | 37.95 |
| CDX84679 | Canola | nucleus | 20.49 | 32.06 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 20.49 | 32.06 |
| CDY26693 | Canola | plastid | 19.27 | 29.26 |
| CDY07239 | Canola | plasma membrane | 16.1 | 28.57 |
| CDY41027 | Canola | cytosol | 18.05 | 27.82 |
| CDY41028 | Canola | nucleus, plastid | 16.59 | 27.42 |
| CDY01503 | Canola | cytosol | 17.32 | 27.41 |
| CDY26694 | Canola | cytosol, plastid | 17.32 | 27.1 |
| CDY47428 | Canola | nucleus | 20.24 | 26.86 |
| CDY07238 | Canola | nucleus | 20.49 | 26.58 |
| CDY48928 | Canola | nucleus | 21.95 | 26.16 |
| CDX71746 | Canola | nucleus | 21.95 | 26.16 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 20.98 | 26.14 |
| CDX98767 | Canola | nucleus | 20.98 | 26.14 |
| CDY26692 | Canola | nucleus | 19.27 | 26.07 |
| CDY68252 | Canola | nucleus | 18.54 | 25.59 |
| CDY37070 | Canola | nucleus | 21.22 | 25.51 |
| CDX89109 | Canola | nucleus | 20.73 | 25.37 |
| CDY41291 | Canola | nucleus | 18.78 | 25.25 |
| CDY42495 | Canola | nucleus | 20.73 | 25.15 |
| CDY04392 | Canola | nucleus | 16.34 | 25.0 |
| CDY25500 | Canola | nucleus | 22.44 | 24.86 |
| CDY27354 | Canola | nucleus | 20.98 | 24.64 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 21.71 | 24.59 |
| CDY01506 | Canola | nucleus | 17.8 | 24.25 |
| CDX94457 | Canola | nucleus | 22.2 | 24.07 |
| CDX92693 | Canola | nucleus | 23.17 | 23.99 |
| CDY49703 | Canola | nucleus | 23.17 | 23.81 |
| CDY26691 | Canola | cytosol, plastid | 18.05 | 23.79 |
| CDX82971 | Canola | plastid | 12.44 | 23.72 |
| CDY45364 | Canola | nucleus | 21.22 | 23.71 |
| CDY58791 | Canola | nucleus | 18.78 | 23.48 |
| CDX89422 | Canola | nucleus | 21.95 | 23.44 |
| CDY34355 | Canola | nucleus | 21.46 | 23.28 |
| CDY51561 | Canola | nucleus | 19.27 | 23.24 |
| CDY35172 | Canola | nucleus | 19.76 | 22.95 |
| CDY37704 | Canola | nucleus | 20.73 | 22.67 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 21.71 | 22.36 |
| CDX78814 | Canola | nucleus | 22.2 | 22.36 |
| CDY03203 | Canola | nucleus | 19.27 | 22.07 |
| CDX87241 | Canola | nucleus | 20.98 | 21.99 |
| CDY38874 | Canola | nucleus | 22.68 | 21.99 |
| CDY16785 | Canola | nucleus | 20.98 | 21.94 |
| CDY46385 | Canola | nucleus | 20.0 | 21.47 |
| CDY39751 | Canola | nucleus | 20.0 | 21.47 |
| CDY32624 | Canola | nucleus | 22.2 | 21.46 |
| CDX86910 | Canola | nucleus | 20.73 | 21.3 |
| CDY44500 | Canola | nucleus | 21.71 | 21.19 |
| CDY00271 | Canola | nucleus | 20.73 | 21.09 |
| CDX99902 | Canola | nucleus | 22.44 | 20.96 |
| CDY30710 | Canola | nucleus | 20.49 | 20.95 |
| CDY08882 | Canola | nucleus | 22.2 | 20.92 |
| CDY65097 | Canola | nucleus | 21.22 | 20.76 |
| CDY00488 | Canola | nucleus | 21.71 | 20.75 |
| CDX76549 | Canola | nucleus | 22.2 | 20.68 |
| CDX91598 | Canola | nucleus | 20.98 | 20.53 |
Protein Annotations
| EnsemblPlants:CDY13231 | EnsemblPlantsGene:GSBRNA2T00071137001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY13231 | ProteinID:CDY13231.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EE87A1 | UniProt:A0A078FJ72 | MapMan:35.1 | : | : |
Description
BnaC04g26040DBnaC04g26040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ72]
Coordinates
chrLK032032:+:816112..818484
Molecular Weight (calculated)
44188.2 Da
IEP (calculated)
9.072
GRAVY (calculated)
-0.512
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDERHHHH HHHQEHHLTS PYYHPFHHHT PTTVSAAPSY NGNMPPPPPP NDGSSSSYHH SAPSSAVTAP IEPVKRKRGR PRKYDTPAQA LAAKKLASSA
101: SSSSARERRE QAAAGGVSPP SKPGSKKSIS GSFGLILESR VLCVLCELCL YWKNGQSFTP HIVNITPGED VAQKIILFAE QSKHELCILS ASGAISDPSL
201: SHLATGTSVS YQGQYEILSL RGSYIRGEHG GKTGGLSVCL SSSDGQIVGG GVGGLLKAAG PVQVILGTFQ LERKKDGRNG VKAKQEVGIS MITYMARYNY
301: YGLMQVPQSR LTWPALLEHP FIKESLEEVE AREMHTAVVD HKGAWRLKGN GGQQRNEKCD SATPFKDASA LGIVADVQSD MKSAVKVNSP SPEDFLGFPT
401: QEGIKSSGNR
101: SSSSARERRE QAAAGGVSPP SKPGSKKSIS GSFGLILESR VLCVLCELCL YWKNGQSFTP HIVNITPGED VAQKIILFAE QSKHELCILS ASGAISDPSL
201: SHLATGTSVS YQGQYEILSL RGSYIRGEHG GKTGGLSVCL SSSDGQIVGG GVGGLLKAAG PVQVILGTFQ LERKKDGRNG VKAKQEVGIS MITYMARYNY
301: YGLMQVPQSR LTWPALLEHP FIKESLEEVE AREMHTAVVD HKGAWRLKGN GGQQRNEKCD SATPFKDASA LGIVADVQSD MKSAVKVNSP SPEDFLGFPT
401: QEGIKSSGNR
001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGKVCRV
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGKVCRV
Arabidopsis Description
AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.