Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52506 | Canola | nucleus | 73.61 | 45.56 |
| CDY05594 | Canola | nucleus | 74.54 | 45.22 |
| Bra020612.1-P | Field mustard | nucleus | 73.61 | 45.17 |
| CDY52477 | Canola | nucleus | 74.07 | 43.48 |
| Bra009999.1-P | Field mustard | nucleus | 74.54 | 43.28 |
| CDY65362 | Canola | nucleus | 74.07 | 43.01 |
| AT3G04590.2 | Thale cress | nucleus | 61.11 | 32.12 |
| KRH68809 | Soybean | nucleus | 48.15 | 30.06 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 49.07 | 29.69 |
| CDY13231 | Canola | nucleus | 55.56 | 29.27 |
| KRG97062 | Soybean | nucleus | 48.61 | 29.09 |
| PGSC0003DMT400073848 | Potato | nucleus | 40.74 | 26.67 |
| Solyc11g006190.1.1 | Tomato | nucleus | 40.28 | 25.82 |
| AT2G33620.2 | Thale cress | nucleus | 30.09 | 18.52 |
| AT4G00200.2 | Thale cress | nucleus | 25.93 | 17.61 |
| AT4G12080.1 | Thale cress | nucleus | 27.31 | 16.57 |
| AT4G22770.1 | Thale cress | nucleus | 24.54 | 15.87 |
| AT1G63480.1 | Thale cress | nucleus | 26.39 | 15.79 |
| AT5G46640.1 | Thale cress | nucleus | 27.78 | 15.54 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 25.0 | 15.25 |
| AT2G45850.1 | Thale cress | nucleus | 24.07 | 14.94 |
| AT1G63470.1 | Thale cress | nucleus | 25.93 | 14.81 |
| AT4G25320.1 | Thale cress | nucleus | 27.31 | 14.6 |
| AT4G17950.1 | Thale cress | nucleus | 27.31 | 13.44 |
| AT5G51590.1 | Thale cress | nucleus | 25.93 | 13.37 |
| AT5G62260.3 | Thale cress | nucleus | 24.07 | 12.87 |
Protein Annotations
| MapMan:35.1 | EntrezGene:832956 | ProteinID:AED93815.1 | ArrayExpress:AT5G28590 | EnsemblPlantsGene:AT5G28590 | RefSeq:AT5G28590 |
| TAIR:AT5G28590 | RefSeq:AT5G28590-TAIR-G | EnsemblPlants:AT5G28590.1 | TAIR:AT5G28590.1 | Unigene:At.55073 | UniProt:F4K8J6 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 |
| InterPro:IPR005175 | RefSeq:NP_198211.1 | PFAM:PF03479 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0025281 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF22 | SUPFAM:SSF117856 |
| UniParc:UPI0000162652 | SEG:seg | : | : | : | : |
Description
DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:F4K8J6]
Coordinates
chr5:-:10579446..10581559
Molecular Weight (calculated)
22537.8 Da
IEP (calculated)
9.490
GRAVY (calculated)
-0.386
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMYYKRLN RLKSPTIRFS VALSKTGQCF TPHIVNITPG EDVAEKIVLF TQQSKHQLCV LSASGSISNA SLSHLASGTS HGGKTGGLSV CLSNSDGQIF
101: GGGVGGLLKA AGPVQVVLGT FQLEKKKDGR NGAKGDDASG SRNMLPSPSG TESLLGYHPD MESSGRNPND EHHTITSSAL GGGAHFMMKP PQGMHMTHAR
201: PSEWGGTGYD LSGKSS
101: GGGVGGLLKA AGPVQVVLGT FQLEKKKDGR NGAKGDDASG SRNMLPSPSG TESLLGYHPD MESSGRNPND EHHTITSSAL GGGAHFMMKP PQGMHMTHAR
201: PSEWGGTGYD LSGKSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.