Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32624 | Canola | nucleus | 80.67 | 79.72 |
| CDY00488 | Canola | nucleus | 81.38 | 79.49 |
| Bra028265.1-P | Field mustard | nucleus | 81.15 | 79.25 |
| Bra029164.1-P | Field mustard | nucleus | 80.19 | 79.25 |
| CDY38874 | Canola | nucleus | 79.71 | 78.96 |
| CDX99902 | Canola | nucleus | 78.04 | 74.49 |
| CDY65097 | Canola | nucleus | 71.84 | 71.84 |
| CDX91598 | Canola | nucleus | 71.84 | 71.84 |
| Bra022555.1-P | Field mustard | nucleus | 71.36 | 71.36 |
| AT4G25320.1 | Thale cress | nucleus | 64.44 | 66.83 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.86 | 47.58 |
| KRH34345 | Soybean | nucleus | 37.23 | 47.27 |
| KRG92455 | Soybean | nucleus | 36.99 | 46.97 |
| Solyc03g007150.2.1 | Tomato | nucleus | 35.08 | 45.23 |
| PGSC0003DMT400071865 | Potato | plastid | 32.46 | 44.16 |
| KRH09229 | Soybean | nucleus | 35.56 | 43.31 |
| AT5G62260.3 | Thale cress | nucleus | 41.53 | 43.07 |
| KRH38723 | Soybean | nucleus | 35.32 | 43.02 |
| PGSC0003DMT400079651 | Potato | nucleus | 34.61 | 41.91 |
| AT4G00200.2 | Thale cress | nucleus | 31.26 | 41.2 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 32.7 | 40.77 |
| Solyc06g035430.2.1 | Tomato | nucleus | 33.17 | 40.17 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 36.28 | 39.9 |
| AT4G12080.1 | Thale cress | nucleus | 32.22 | 37.92 |
| AT4G22770.1 | Thale cress | nucleus | 30.07 | 37.72 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 34.13 | 37.43 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 33.89 | 36.41 |
| Os08t0118000-01 | Rice | nucleus | 32.22 | 36.29 |
| TraesCS7B01G215600.1 | Wheat | plastid | 32.94 | 35.03 |
| AT2G33620.2 | Thale cress | nucleus | 29.12 | 34.76 |
| HORVU7Hr1G075040.1 | Barley | plastid | 32.46 | 34.61 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 31.98 | 34.27 |
| KXG24283 | Sorghum | plastid | 31.98 | 34.1 |
| TraesCS7D01G312100.1 | Wheat | plastid | 32.22 | 34.01 |
| TraesCS7A01G315100.1 | Wheat | plastid | 32.22 | 33.92 |
| AT2G45850.1 | Thale cress | nucleus | 25.78 | 31.03 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 25.06 | 29.66 |
| AT5G46640.1 | Thale cress | nucleus | 26.73 | 29.02 |
| AT1G63470.1 | Thale cress | nucleus | 25.06 | 27.78 |
| AT5G28590.1 | Thale cress | mitochondrion | 13.37 | 25.93 |
| AT4G17950.1 | Thale cress | nucleus | 26.73 | 25.51 |
| AT1G63480.1 | Thale cress | nucleus | 21.96 | 25.48 |
| AT3G04590.2 | Thale cress | nucleus | 22.67 | 23.11 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:835233 | EMBL:AB493788 | ProteinID:AED96101.1 | ArrayExpress:AT5G51590 |
| EnsemblPlantsGene:AT5G51590 | RefSeq:AT5G51590 | TAIR:AT5G51590 | RefSeq:AT5G51590-TAIR-G | EnsemblPlants:AT5G51590.1 | TAIR:AT5G51590.1 |
| ProteinID:BAB08675.1 | EMBL:BR000340 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010089 | GO:GO:0043621 | InterPro:IPR005175 | RefSeq:NP_199972.1 |
| PFAM:PF03479 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003011 | PO:PO:0004507 |
| PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0025022 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF44 | UniProt:Q9FHM5 |
| SUPFAM:SSF117856 | UniParc:UPI00000A9AA4 | SEG:seg | : | : | : |
Description
AHL4AT-hook motif nuclear-localized protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM5]
Coordinates
chr5:-:20956510..20959409
Molecular Weight (calculated)
44596.7 Da
IEP (calculated)
6.192
GRAVY (calculated)
-0.705
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEREGTNIN NIPTSFGLKQ HETPLPPPGY PPRSENPNLF PVGQSSTSSA AAAVKPSENV APPFSLTMPV ENSSSELKKK RGRPRKYNPD GSLAVTLSPM
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.