Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42495 | Canola | nucleus | 78.53 | 82.25 |
| Bra014444.1-P | Field mustard | nucleus | 75.71 | 80.48 |
| Bra007595.1-P | Field mustard | nucleus | 77.4 | 80.35 |
| CDX89109 | Canola | nucleus | 75.99 | 80.3 |
| CDY48928 | Canola | nucleus | 77.12 | 79.36 |
| CDY58791 | Canola | nucleus | 73.45 | 79.27 |
| CDX71746 | Canola | nucleus | 75.99 | 78.2 |
| CDY51561 | Canola | nucleus | 74.86 | 77.94 |
| Bra003446.1-P | Field mustard | nucleus | 70.34 | 73.45 |
| AT2G45850.1 | Thale cress | nucleus | 68.08 | 69.25 |
| KRH65066 | Soybean | nucleus | 52.26 | 54.41 |
| KRH48165 | Soybean | nucleus | 52.26 | 54.41 |
| KRH40471 | Soybean | nucleus | 51.98 | 53.96 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 52.54 | 53.91 |
| KRH00715 | Soybean | nucleus | 51.69 | 53.51 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 47.18 | 50.15 |
| PGSC0003DMT400000467 | Potato | nucleus | 44.35 | 46.31 |
| Solyc01g094460.2.1 | Tomato | nucleus | 44.35 | 46.31 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 44.35 | 45.38 |
| GSMUA_Achr11P... | Banana | nucleus | 47.18 | 44.53 |
| GSMUA_Achr11P... | Banana | nucleus | 46.33 | 44.2 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 24.01 | 43.37 |
| HORVU2Hr1G123730.3 | Barley | plastid | 23.16 | 39.05 |
| AT1G63470.1 | Thale cress | nucleus | 40.96 | 38.36 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 32.49 | 37.46 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 34.46 | 37.42 |
| AT1G63480.1 | Thale cress | nucleus | 37.57 | 36.84 |
| Zm00001d018515_P002 | Maize | nucleus | 37.85 | 34.54 |
| Os02t0824300-01 | Rice | nucleus | 37.85 | 34.01 |
| OQU85994 | Sorghum | nucleus | 38.42 | 33.92 |
| AT4G00200.2 | Thale cress | nucleus | 29.66 | 33.02 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 37.29 | 33.0 |
| AT5G46640.1 | Thale cress | nucleus | 34.18 | 31.35 |
| AT4G12080.1 | Thale cress | nucleus | 31.36 | 31.18 |
| AT2G33620.2 | Thale cress | nucleus | 30.79 | 31.05 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 34.18 | 29.95 |
| AT4G22770.1 | Thale cress | nucleus | 27.97 | 29.64 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 33.62 | 29.53 |
| Zm00001d026652_P001 | Maize | plastid | 32.49 | 28.97 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 33.05 | 28.89 |
| Os04t0683900-01 | Rice | nucleus | 33.05 | 27.92 |
| KXG27470 | Sorghum | nucleus | 32.49 | 27.51 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 36.44 | 27.39 |
| AT4G17950.1 | Thale cress | nucleus | 33.05 | 26.65 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 25.99 | 26.36 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 38.42 | 25.61 |
| Zm00001d001784_P002 | Maize | nucleus | 31.07 | 25.29 |
| AT5G51590.1 | Thale cress | nucleus | 29.66 | 25.06 |
| AT5G28590.1 | Thale cress | mitochondrion | 15.25 | 25.0 |
| AT4G25320.1 | Thale cress | nucleus | 27.97 | 24.5 |
| AT3G04590.2 | Thale cress | nucleus | 27.97 | 24.09 |
| AT5G62260.3 | Thale cress | nucleus | 26.84 | 23.51 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825303 | UniProt:A0A178VA95 | ProteinID:AEE80186.1 | ArrayExpress:AT3G61310 | EnsemblPlantsGene:AT3G61310 |
| RefSeq:AT3G61310 | TAIR:AT3G61310 | RefSeq:AT3G61310-TAIR-G | EnsemblPlants:AT3G61310.1 | TAIR:AT3G61310.1 | InterPro:AT_hook_DNA-bd_motif |
| EMBL:AY128386 | EMBL:BR000347 | EMBL:BT008837 | ProteinID:CAB71061.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR005175 | RefSeq:NP_191690.2 | ProteinID:OAP03217.1 | PFAM:PF03479 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF44 | UniProt:Q8L7L5 | SMART:SM00384 | SUPFAM:SSF117856 |
| UniParc:UPI00000A4082 | SEG:seg | : | : | : | : |
Description
AHL11AT-hook motif nuclear-localized protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7L5]
Coordinates
chr3:-:22687610..22693150
Molecular Weight (calculated)
36784.2 Da
IEP (calculated)
9.348
GRAVY (calculated)
-0.367
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRRDAMALS GSGSYYIQRG IPGSGPPPPQ TQPTFHGSQG FHHFTNSISP FGSNPNPNPN PGGVSTGFVS PPLPVDSSPA DSSAAAAGAL VAPPSGDTSV
101: KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA
201: VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD
301: TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID LMRG
101: KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA
201: VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD
301: TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID LMRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.