CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87860
EES01452
EES19838
EES19937
KXG27470
KXG29351
KXG33101
KXG38867
OQU78328
OQU82226
OQU85994
OQU87589

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	KXG27470	AT3G61310.1	21798944
AT1G63480.1	OQU85994	AT3G61310.1	21798944
AT1G63480.1	EER87860	AT5G56600.1	21798944
AT1G63480.1	EES01452	AT5G56600.1	21798944
AT1G63480.1	EES19838	AT5G56600.1	21798944
AT1G63480.1	OQU78328	AT5G56600.1	21798944
AT2G45850.1	KXG29351	AT4G12080.1	21798944
AT2G45850.1	KXG38867	AT4G17950.1	21798944
AT2G45850.1	OQU82226	AT4G17950.1	21798944
AT3G61310.1	EES19937	AT1G52240.1	21798944
AT3G61310.1	KXG33101	AT1G52240.1	21798944
AT3G61310.1	OQU87589	AT1G52240.1	21798944
AT3G61310.1	KXG27470	AT2G45850.1	21798944
AT3G61310.1	OQU85994	AT2G45850.1	21798944
AT3G61310.1	KXG27470	AT3G61310.1	21798944
AT3G61310.1	OQU85994	AT3G61310.1	21798944
AT3G61310.1	KXG29351	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026652_P001	Maize	plastid	83.73	88.16
Zm00001d001784_P002	Maize	nucleus	83.25	80.0
HORVU2Hr1G123730.3	Barley	plastid	39.0	77.62
Os04t0683900-01	Rice	nucleus	72.97	72.79
TraesCS2A01G582300.1	Wheat	nucleus	67.7	70.05
TraesCS2B01G604700.1	Wheat	nucleus	66.27	68.73
TraesCS2D01G597900.1	Wheat	cytosol, nucleus, plasma membrane, plastid	66.51	68.64
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	33.49	40.58
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	31.58	39.64
KRH40471	Soybean	nucleus	32.06	39.3
KRH00715	Soybean	nucleus	31.82	38.89
KRH05193	Soybean	plastid	13.4	38.1
KRH65066	Soybean	nucleus	30.62	37.65
GSMUA_Achr4P30000_001	Banana	nucleus	29.19	37.42
KRH48165	Soybean	nucleus	30.38	37.35
GSMUA_Achr8P11400_001	Banana	nucleus	30.38	36.71
VIT_02s0025g03580.t01	Wine grape	nucleus	30.14	36.42
Solyc08g080960.2.1	Tomato	nucleus	28.71	35.93
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	16.75	35.71
Solyc01g094460.2.1	Tomato	nucleus	28.95	35.69
CDY42495	Canola	nucleus	28.47	35.21
PGSC0003DMT400000467	Potato	nucleus	28.47	35.1
GSMUA_Achr11P...	Banana	nucleus	31.1	35.04
Bra014444.1-P	Field mustard	nucleus	27.75	34.83
GSMUA_Achr11P...	Banana	nucleus	31.1	34.67
Bra007595.1-P	Field mustard	nucleus	28.23	34.6
CDY58791	Canola	nucleus	27.03	34.45
CDY51561	Canola	nucleus	27.99	34.41
Solyc08g008030.2.1	Tomato	nucleus	28.47	34.39
KRH27929	Soybean	nucleus	28.95	34.38
CDX89109	Canola	nucleus	27.51	34.33
CDX71746	Canola	nucleus	28.23	34.3
CDY48928	Canola	nucleus	28.23	34.3
PGSC0003DMT400014926	Potato	plastid	28.23	34.2
AT2G45850.1	Thale cress	nucleus	28.23	33.91
CDY37070	Canola	nucleus	27.51	33.72
KRH77536	Soybean	nucleus	28.71	33.61
Bra039309.1-P	Field mustard	nucleus	27.27	33.43
CDY27354	Canola	nucleus	27.75	33.24
OQU85994	Sorghum	nucleus	31.82	33.17
OQU82226	Sorghum	plastid	27.03	32.56
AT3G61310.1	Thale cress	nucleus, plastid	27.51	32.49
CDY25500	Canola	nucleus	28.47	32.16
Bra003446.1-P	Field mustard	nucleus	26.08	32.15
KRH59866	Soybean	nucleus	26.55	31.53
CDY45364	Canola	nucleus	27.51	31.34
KRH41165	Soybean	nucleus	26.32	31.25
AT1G63470.1	Thale cress	nucleus	28.23	31.22
CDY64088	Canola	nucleus, plasma membrane, plastid	27.03	31.22
Bra025511.1-P	Field mustard	nucleus	20.57	31.05
Bra027642.1-P	Field mustard	nucleus	28.23	30.97
Bra027801.1-P	Field mustard	nucleus	27.75	30.93
PGSC0003DMT400031843	Potato	plastid	28.23	30.73
KXG25625	Sorghum	nucleus	27.27	30.56
CDY34355	Canola	nucleus	27.03	29.89
OQU76344	Sorghum	nucleus	25.36	29.28
OQU89696	Sorghum	nucleus	26.55	29.13
EES15662	Sorghum	cytosol, nucleus, peroxisome	24.64	28.93
AT1G63480.1	Thale cress	nucleus	24.88	28.81
EES07975	Sorghum	cytosol	23.68	27.35
KXG24283	Sorghum	plastid	25.12	26.72
KXG38867	Sorghum	plastid	26.79	26.48
KXG29351	Sorghum	plastid	23.21	25.87
CDY46385	Canola	nucleus	23.45	25.65
CDY39751	Canola	nucleus	23.45	25.65

Protein Annotations

EnsemblPlants:KXG27470	EnsemblPlantsGene:SORBI_3006G273000	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF19	PFAM:PF03479	PFscan:PS51742	ProteinID:KXG27470	ProteinID:KXG27470.1	SEG:seg
SUPFAM:SSF117856	UniParc:UPI00022071D1	UniProt:A0A1B6PP73	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:-:60442444..60445431

Molecular Weight (calculated)

42980.6 Da

IEP (calculated)

10.550

GRAVY (calculated)

-0.485

Length

418 amino acids

Sequence
(BLAST)

001: MDGKELISQS DLQSFYQQQQ QQQQHRAFGG GGGHHSPSSL AGMHSVIRPM PNMPNMNMSP TAILNSIGGG SLAGMQFQMD PPPPPLLHTT TAAAAMGGSA
101: SGPGAVPPVH AEPVKRKRGR PRKYGPDGTM KQQQQQQQAA ASQQHLVAAP PRMGSLSSGP DMLGGSGMED AAQKKRRGRP PGTGKKHQPS PSQGNAFAGS
201: AGTSFTPHII TVSPSEDVAA KIVAFATQSS RAVCVLSAMG SVSRAVLRHP ADGSPMARVH AASPQPYKNN PAIYEGFYEI LSLTGSYNLA EGSQAQGQGQ
301: QSGGLSVTLC SPERNVIGGV LGGPLVAAST VQVVLGTFHQ GGSRSKSKKA GKLQQQQQAA TATAAAFSSD SLTGGQEASP SSGHNQNLTP PPSVTGGWPT
401: SGIFDTRSSS IDINSSRG

Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)

001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG

Arabidopsis Description

AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.