Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45364 | Canola | nucleus | 96.41 | 95.1 |
| CDY25500 | Canola | nucleus | 85.08 | 83.24 |
| CDY34355 | Canola | nucleus | 85.91 | 82.28 |
| AT1G63470.1 | Thale cress | nucleus | 82.87 | 79.37 |
| CDY46385 | Canola | nucleus | 61.88 | 58.64 |
| KRH05193 | Soybean | plastid | 23.76 | 58.5 |
| CDY39751 | Canola | nucleus | 61.6 | 58.38 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 51.93 | 54.34 |
| KRH27929 | Soybean | nucleus | 50.0 | 51.42 |
| KRH59866 | Soybean | nucleus | 49.45 | 50.85 |
| KRH77536 | Soybean | nucleus | 49.45 | 50.14 |
| KRH41165 | Soybean | nucleus | 48.34 | 49.72 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 45.3 | 49.25 |
| Solyc08g080960.2.1 | Tomato | nucleus | 43.37 | 47.01 |
| PGSC0003DMT400014926 | Potato | plastid | 44.2 | 46.38 |
| Solyc08g008030.2.1 | Tomato | nucleus | 44.2 | 46.24 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 43.09 | 45.09 |
| GSMUA_Achr11P... | Banana | nucleus | 44.75 | 43.67 |
| GSMUA_Achr11P... | Banana | nucleus | 44.75 | 43.2 |
| CDY48928 | Canola | nucleus | 40.06 | 42.15 |
| CDY37070 | Canola | nucleus | 39.5 | 41.94 |
| CDX71746 | Canola | nucleus | 39.78 | 41.86 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 22.65 | 41.84 |
| CDY42495 | Canola | nucleus | 38.95 | 41.72 |
| CDY27354 | Canola | nucleus | 39.78 | 41.26 |
| CDX84679 | Canola | nucleus | 29.83 | 41.22 |
| CDX89109 | Canola | nucleus | 38.12 | 41.19 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 29.56 | 40.84 |
| PGSC0003DMT400031843 | Potato | plastid | 42.82 | 40.36 |
| CDY58791 | Canola | nucleus | 36.19 | 39.94 |
| CDY51561 | Canola | nucleus | 37.29 | 39.71 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 32.32 | 35.89 |
| Zm00001d018515_P002 | Maize | nucleus | 37.85 | 35.31 |
| HORVU2Hr1G123730.3 | Barley | plastid | 20.44 | 35.24 |
| Os02t0824300-01 | Rice | nucleus | 38.12 | 35.03 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 29.28 | 34.53 |
| OQU85994 | Sorghum | nucleus | 38.12 | 34.41 |
| CDY04392 | Canola | nucleus | 24.86 | 33.58 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 37.02 | 33.5 |
| CDY47428 | Canola | nucleus | 28.18 | 33.01 |
| CDY07239 | Canola | plasma membrane | 20.99 | 32.9 |
| CDY41291 | Canola | nucleus | 26.8 | 31.8 |
| CDX82971 | Canola | plastid | 18.78 | 31.63 |
| CDX98767 | Canola | nucleus | 28.73 | 31.61 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 28.73 | 31.61 |
| CDY07238 | Canola | nucleus | 27.07 | 31.01 |
| CDY01503 | Canola | cytosol | 22.1 | 30.89 |
| CDY37704 | Canola | nucleus | 31.22 | 30.13 |
| CDY41028 | Canola | nucleus, plastid | 20.44 | 29.84 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 37.29 | 28.66 |
| Os04t0683900-01 | Rice | nucleus | 33.15 | 28.64 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 31.77 | 28.54 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 31.22 | 28.39 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 31.49 | 28.22 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 31.22 | 27.9 |
| CDX78814 | Canola | nucleus | 30.66 | 27.27 |
| CDY08882 | Canola | nucleus | 32.6 | 27.13 |
| KXG27470 | Sorghum | nucleus | 31.22 | 27.03 |
| Zm00001d026652_P001 | Maize | plastid | 29.56 | 26.95 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 39.5 | 26.93 |
| CDX76549 | Canola | nucleus | 32.6 | 26.82 |
| CDY03203 | Canola | nucleus | 26.24 | 26.54 |
| CDY44500 | Canola | nucleus | 30.66 | 26.43 |
| CDY26692 | Canola | nucleus | 22.1 | 26.4 |
| CDY35172 | Canola | nucleus | 25.69 | 26.35 |
| CDY16785 | Canola | nucleus | 28.45 | 26.28 |
| CDX87241 | Canola | nucleus | 28.18 | 26.09 |
| CDY65097 | Canola | nucleus | 30.11 | 26.01 |
| CDX92693 | Canola | nucleus | 28.45 | 26.01 |
| CDY49703 | Canola | nucleus | 28.45 | 25.81 |
| CDY52506 | Canola | nucleus | 24.86 | 25.79 |
| CDY05594 | Canola | nucleus | 25.14 | 25.56 |
| CDY26693 | Canola | plastid | 19.06 | 25.56 |
| CDX86910 | Canola | nucleus | 27.9 | 25.31 |
| CDY00271 | Canola | nucleus | 28.18 | 25.31 |
| CDY38874 | Canola | nucleus | 29.56 | 25.3 |
| CDY26694 | Canola | cytosol, plastid | 18.23 | 25.19 |
| CDX94457 | Canola | nucleus | 26.24 | 25.13 |
| CDY21122 | Canola | nucleus | 26.8 | 25.13 |
| CDX91598 | Canola | nucleus | 29.01 | 25.06 |
| CDY32624 | Canola | nucleus | 29.01 | 24.76 |
| CDX89422 | Canola | nucleus | 26.24 | 24.74 |
| CDY65362 | Canola | nucleus | 25.41 | 24.73 |
| CDY52477 | Canola | nucleus | 25.14 | 24.73 |
| CDY00488 | Canola | nucleus | 29.28 | 24.71 |
| CDY41027 | Canola | cytosol | 17.96 | 24.44 |
| CDY30005 | Canola | nucleus | 25.69 | 24.41 |
| CDY30710 | Canola | nucleus | 26.8 | 24.19 |
| Zm00001d001784_P002 | Maize | nucleus | 29.01 | 24.14 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 23.2 | 24.07 |
| CDY68252 | Canola | nucleus | 19.61 | 23.91 |
| CDX99902 | Canola | nucleus | 28.73 | 23.69 |
| CDY01506 | Canola | nucleus | 19.61 | 23.59 |
| CDY26691 | Canola | cytosol, plastid | 19.61 | 22.83 |
| CDY13231 | Canola | nucleus | 24.59 | 21.71 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | GO:A0A078J9U7 | UniProt:A0A078J9U7 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY64088 |
| ProteinID:CDY64088 | ProteinID:CDY64088.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00040865001 | InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PRINTS:PR00929 | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF9 | SMART:SM00384 | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0004EE14CC |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng43040DBnaCnng43040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9U7]
Coordinates
chrLK034398:-:2961..4936
Molecular Weight (calculated)
38013.9 Da
IEP (calculated)
9.364
GRAVY (calculated)
-0.479
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGREAMAFP GSHPHYYLQR GGAFTNLSPS QVASGLHAPP GMRPMPNPNV YHPLANNPGP QFSMADHRHS GFGHSIHMGM SSSVAVEQQP PPPMVKKKRG
101: RPRKYAPEGQ VSLGLSPMPS SSSAVTDPNA PKRARGRPPG TGRKQRLANL GEWMNTSAGL AFAPHVISVE AGEDVVSKVM AFSQQRPRAL CIMSGTGTVS
201: SVTLRQPATT EASVTFEGRF EILSLGGSYL VNEGGGPKSR TGGLSVSLSG PEGHVLGGGI GMLIAASLVQ VVACSFIYGG VAKPNNTNKT IKQENKPKEE
301: HDNSEMETTP ANAPEEAHET PQDFSAQAMS GWPGSGEGSV SGSGRSLDSS RNLLTDIDLT RG
101: RPRKYAPEGQ VSLGLSPMPS SSSAVTDPNA PKRARGRPPG TGRKQRLANL GEWMNTSAGL AFAPHVISVE AGEDVVSKVM AFSQQRPRAL CIMSGTGTVS
201: SVTLRQPATT EASVTFEGRF EILSLGGSYL VNEGGGPKSR TGGLSVSLSG PEGHVLGGGI GMLIAASLVQ VVACSFIYGG VAKPNNTNKT IKQENKPKEE
301: HDNSEMETTP ANAPEEAHET PQDFSAQAMS GWPGSGEGSV SGSGRSLDSS RNLLTDIDLT RG
001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
Arabidopsis Description
AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.